HHsearch alignment for GI: 254780893 and conserved domain: cd02069

>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).

Probab=91.80  E-value=0.45  Score=26.88  Aligned_cols=95  Identities=20%  Similarity=0.194  Sum_probs=62.5

Q ss_pred             CCHHHHHHH-HHHHHHCCCEEEEE---CCHHHHHHHHHHCCCCEEEECCCC-CCCCCC-CCCCCCCCCCCCCCEECCCCC
Q ss_conf             998999999-99999889899999---998999999985799478831149-874334-311122223223310013332
Q gi|254780893|r    8 DDKALAHSI-ELMLKSENFNVYVT---DLGEDGIELCKFYEFDAIILDLGL-TDIPGF-EVLRALRVAKISTPVCILSGM   81 (236)
Q Consensus         8 dd~~~~~~l-~~~L~~~g~~v~~a---~~~~eal~~~~~~~~DlvIlD~~l-p~~~G~-~~~~~ir~~~~~~pII~ls~~   81 (236)
T Consensus        99 D~HdiGkniv~~~l~~~Gf~V~dLG~dv~~e~~v~~~~~~~~divglSallTtTm~~mk~vi~~l~~~g~~vkv~vGGa~  178 (213)
T cd02069          99 DVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGGAA  178 (213)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             63412189999999978966885058998999999999749999998323030499999999999974998179971632


Q ss_pred             CCHHC---CCCCCCCCCCCCCCCC
Q ss_conf             10000---0112322101112233
Q gi|254780893|r   82 SSIED---KVRGLQSGADDYISKP  102 (236)
Q Consensus        82 ~~~~~---~~~al~~GAddyi~KP  102 (236)
T Consensus       179 vt~~fa~~~~~~~y~Gad~y~~dA  202 (213)
T cd02069         179 TSRKHTAVKIAPEYDGPVVYVKDA  202 (213)
T ss_pred             CCHHHHHHHHHHCCCCCCEEECCH
T ss_conf             788899876410367980784399