HHsearch alignment for GI: 254780893 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=92.10 E-value=0.38 Score=27.31 Aligned_cols=96 Identities=25% Similarity=0.267 Sum_probs=67.3
Q ss_pred EEEEECCCH----HHHHHH--HHHHHHCCCEEEE--ECCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----CCCCCCCC
Q ss_conf 599986998----999999--9999988989999--9998999999985799478831149874334-----31112222
Q gi|254780893|r 2 RILLIEDDK----ALAHSI--ELMLKSENFNVYV--TDLGEDGIELCKFYEFDAIILDLGLTDIPGF-----EVLRALRV 68 (236)
Q Consensus 2 kILivedd~----~~~~~l--~~~L~~~g~~v~~--a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~-----~~~~~ir~ 68 (236)
T Consensus 95 KLEVi~D~~~LlPD~~eTl~Aae~Lv~~GF~VlpY~~~D~v~akrLe~~Gc--~avMPlgsPIGSg~Gl~n~~~l~~i~e 172 (248)
T cd04728 95 KLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDAGC--AAVMPLGSPIGSGQGLLNPYNLRIIIE 172 (248)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCC--EEEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 999817976779886899999999998899897867889999999997495--345204564347988799999999998
Q ss_pred CCCCCCEECCCCCCCHHCCCCCCCCCCCCCCC
Q ss_conf 32233100133321000001123221011122
Q gi|254780893|r 69 AKISTPVCILSGMSSIEDKVRGLQSGADDYIS 100 (236)
Q Consensus 69 ~~~~~pII~ls~~~~~~~~~~al~~GAddyi~ 100 (236)
T Consensus 173 ~~-~vPvIVDAGiG~pS~Aa~aMElG~daVL~ 203 (248)
T cd04728 173 RA-DVPVIVDAGIGTPSDAAQAMELGADAVLL 203 (248)
T ss_pred HC-CCCEEEECCCCCHHHHHHHHHCCCCEEEH
T ss_conf 47-99889847999756789998726553345