HHsearch alignment for GI: 254780893 and conserved domain: pfam02082
>pfam02082 Rrf2 Transcriptional regulator. This family is related to pfam001022 and other transcription regulation families (personal obs: Yeats C).
Probab=92.87 E-value=0.15 Score=29.70 Aligned_cols=60 Identities=22% Similarity=0.366 Sum_probs=40.0
Q ss_pred HHHHHHHHHC-CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC--EEEECCCCCC
Q ss_conf 6889998718-99737899999987188777775303667899988511067888438888782--0264568875
Q gi|254780893|r 155 YQMIELLSLR-KNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGR--GYVLRENAKD 227 (236)
Q Consensus 155 ~~lL~~L~~~-~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~--GY~l~~~~~~ 227 (236)
T Consensus 10 l~~l~~La~~~~~~~~s~~~iA~~~-----~i~----~~~l~kil~~L~~----~gli~s~rG~~GGy~L~k~~~~ 72 (82)
T pfam02082 10 LHALLYLALHPGEGPVTSEEIAERQ-----NIS----PVYLRKILAKLRK----AGLVKSVRGPGGGYRLARPPEE 72 (82)
T ss_pred HHHHHHHHHCCCCCEECHHHHHHHH-----CCC----HHHHHHHHHHHHC----CCCEEECCCCCCCCCCCCCHHH
T ss_conf 9999999818999849599999878-----909----9999999998102----7982565899988113489898