RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1kgs
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 Length = 225
Score = 166 bits (421), Expect = 3e-42
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 1/223 (0%)
Query: 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
+R+L++ED++ LA I LK E F V V GE+G+ + FD +ILD+ L G+
Sbjct: 3 VRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGW 62
Query: 61 EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
E+L+++R + ++TPV +L+ +S +E +V+GL GADDY+ KPF+ EL+AR+RA++RR
Sbjct: 63 EILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKS 122
Query: 121 GHAQSLIVTGDLSVNLDAKTVEVQGHRIHLTGKEYQMIELLSLRKNTTLTKEMFLNHLYD 180
+ +V GDL ++ K I LT KEYQ++E L + KN +TKE HL+
Sbjct: 123 ESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLWS 182
Query: 181 GRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLRE 223
DE ++ I LRKK+ + K I TV G GYV R+
Sbjct: 183 FDDEVFSDVLRSHIKNLRKKV-DKGFKKKIIHTVRGIGYVARD 224