RPSBLAST alignment of GI: 254780893 and protein with PDBid: 1ny5

>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, dimer; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 1zy2_A* Length = 387

 Score = 91.1 bits (226), Expect = 2e-19
 Identities = 34/120 (28%), Positives = 63/120 (52%)

Query: 1   MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGF 60
           M +L+IEDDK     +E  L  +   V   + G++  +L     F+ ++LDL L D+ G 
Sbjct: 1   MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGL 60

Query: 61  EVLRALRVAKISTPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSR 120
           E+L+ ++     T V +++G  +I+  V  ++ GA D+++KP   EE+   I   +   +
Sbjct: 61  EILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRK 120