RPSBLAST alignment of GI: 254780893 and protein with PDBid: 3klo
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A* Length = 225
Score = 67.8 bits (165), Expect = 2e-12
Identities = 11/131 (8%), Positives = 38/131 (29%), Gaps = 4/131 (3%)
Query: 1 MRILLIEDDKALAHSIELMLKSE---NFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDI 57
+ + ++ D + ++ L+S+ + + +++D
Sbjct: 8 LNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISD 67
Query: 58 PGFEVLRALRVAKI-STPVCILSGMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIV 116
+ + I++ IE K+ + + + L+ + I+
Sbjct: 68 DVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKIL 127
Query: 117 RRSRGHAQSLI 127
+ + L
Sbjct: 128 QDEMWLTRKLA 138