HHsearch alignment for GI: 254780896 and conserved domain: PRK09512

>PRK09512 rbsC ribose ABC transporter permease protein; Reviewed.
Probab=100.00  E-value=2.1e-36  Score=238.90  Aligned_cols=278  Identities=14%  Similarity=0.137  Sum_probs=210.1

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             99999753014723799999999999999999999999843224899999999999999972045653036533578898
Q gi|254780896|r   24 LLLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMIS  103 (351)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~alGl~li~G~~G~inl~~g~~~~~Gay~~~~l~~~~g~~~~~ai~~a~~~~  103 (351)
T Consensus        31 ~~f~~~~p~Fls~~N~~~il~~~a~~~ilalG~~~vi-i~GgiDLSvgs~~~l~~~~~~~l~-~~~~~~~lai~~~l~~G  108 (321)
T PRK09512         31 AIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVI-LTSGIDLSVGSLLALTGAVAASIV-GIEVNALVAVPAALALG  108 (321)
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHH
T ss_conf             9999938886888999999999999999999999999-928973759999999999999984-36897899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             89876544445432134577779998898999998555405876788577652112123476434343333100148999
Q gi|254780896|r  104 GACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLIRFFRFPSSFVIYEIFM  183 (351)
Q Consensus       104 a~~g~l~g~~~~rl~g~~~~i~Tl~~~~i~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (351)
T Consensus       109 ~~~G~iNG~lV~~~~ip~~-I~TLgt~~i~~Gl~~~~t---~g~~-i~~~~~-~~-----~~~~~~~~~-g~~~gi----  172 (321)
T PRK09512        109 AAIGAVTGVIVAKGKVQAF-IATLVMMLLLRGVTMVYT---DGSP-INTGFT-DN-----ADLFGWFGI-GRPLGV----  172 (321)
T ss_pred             HHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHH---CCCC-CCCCCC-CC-----HHHHHHHHC-CCCCCC----
T ss_conf             9999998587763367779-999999999999999982---9921-246776-43-----589999743-651565----


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
Q ss_conf             99999999999999999613059999999642122233420232236799999879999999999986644011354315
Q gi|254780896|r  184 YYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMFKF  263 (351)
Q Consensus       184 ~~~~~~~~~~~~~l~~~l~rT~~G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~l~a~~~~~v~p~~~~~  263 (351)
T Consensus       173 p~~~~i~i~v~ii~~~~l~~T~~Gr~lyAiG~N~~AA~~sGI~v~r~~i~~f~lsg~laglaGil~~~~~~s~~p~~-g~  251 (321)
T PRK09512        173 PTPVWIMAIVFAAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLAALAGIIEVARLSSAQPTA-GT  251 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCC-CC
T ss_conf             69999999999999999986688748879779899999809885148874799999999999999999707888433-44


Q ss_pred             HHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             899998898873474------223899999999999999998731221000012344420258999999999999
Q gi|254780896|r  264 SENIIVISIVILGGM------TSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVI  332 (351)
Q Consensus       264 ~~~~~~~~~vvlGG~------gs~~Ga~lGa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lilvl  332 (351)
T Consensus       252 ~~~l~aIaAvviGG~sl~GG~G~v~Gt~lGal~l~~i~~gl~~~g------------v~~~~q~~v~G~ili~AV  314 (321)
T PRK09512        252 GYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNALNLLG------------VSSYYQMIVKAVVILLAV  314 (321)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC------------CCHHHHHHHHHHHHHHHE
T ss_conf             347999999998043656980774999999999999999998819------------988999999999974314