HHsearch alignment for GI: 254780896 and conserved domain: PRK11301

>PRK11301 livM leucine/isoleucine/valine transporter permease subunit; Provisional.
Probab=100.00  E-value=0  Score=450.25  Aligned_cols=312  Identities=33%  Similarity=0.558  Sum_probs=285.5

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             99997530147237999999999999999999999998432248999999999999999720456530365335788988
Q gi|254780896|r   25 LLFLFLGATKSQKYIDSMGIQILIYVMFAWGLSIVVGSLGLLSLNCVIAYAIGAYSYVILGSRYGLSIWLLIPVSAMISG  104 (351)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~alGl~li~G~~G~inl~~g~~~~~Gay~~~~l~~~~g~~~~~ai~~a~~~~a  104 (351)
T Consensus        96 ~~~~~~~p~~~~~~~~~ia~~~lIY~ilalGLNiv~G~aGllslGhaAFfgIGAYt~AlL~~~~G~~fwlalp~a~l~aa  175 (416)
T PRK11301         96 LVLAVAWPFFVSRGAVDIATLTLIYVILGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLNHYYGLGFWECLPIAGLMAA  175 (416)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             99999988752136899999999999999778999724330336999999999999999997249978999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC---------CCCCCCCC
Q ss_conf             987654444543213457777999889899999855540587678857765211212347643---------43433331
Q gi|254780896|r  105 ACGMIMGLPSLKFRGDYLAIATLIMSEIFQNILIKWKPITNGKAGIYVADRLYFLGTTVRSLI---------RFFRFPSS  175 (351)
Q Consensus       105 ~~g~l~g~~~~rl~g~~~~i~Tl~~~~i~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~---------~~~~~~~~  175 (351)
T Consensus       176 ~~g~llG~P~LRLrG~YLAIaTLaf~eIi~~vl~n~~~lTGG~~Gi~gIp~p~lfG~~~~~~~~~~G~~~f~~~~g~~~~  255 (416)
T PRK11301        176 LFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLLNLTEITGGPNGISQIPKPTLFGLEFSRTAREGGWDTFHEFFGLKYD  255 (416)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999988999803359999999999999999984366429975556799733255343444443333110000254556


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
Q ss_conf             00148999999999999999999996130599999996421222334202322367999998799999999999866440
Q gi|254780896|r  176 FVIYEIFMYYVLLGMCFLSASIILWLRRTAISNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDR  255 (351)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~l~~~l~rT~~G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~l~a~~~~~  255 (351)
T Consensus       256 ~~~~~~~~Y~val~l~~~~~~v~~~L~rS~~GRal~AIRedE~AA~alGInv~r~KL~AFalsA~~AGlAGaLyA~~~g~  335 (416)
T PRK11301        256 PSHRVIFLYLVALLLVVLTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLSAFTIGAAFAGFAGTFFAARQGF  335 (416)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf             32016999999999999999999998618585899999627999998597769999999999999999999999988163


Q ss_pred             ECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             11354315899998898873474223899999999999999998731221000012344420258999999999999985
Q gi|254780896|r  256 ISPDMFKFSENIIVISIVILGGMTSLSKIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMR  335 (351)
Q Consensus       256 v~p~~~~~~~~~~~~~~vvlGG~gs~~Ga~lGa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lilvll~r  335 (351)
T Consensus       336 IsP~~F~~~~S~~iL~mVVlGG~Gs~~G~ilGA~il~~LpE~lr~~---------------~~~r~lvfG~lLvl~mlf~  400 (416)
T PRK11301        336 VSPESFTFIESAFILAIVVLGGMGSQLGVILAAILLVVLPELMRDF---------------NEYRMLMFGLLMVLMMIWR  400 (416)
T ss_pred             ECCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHC
T ss_conf             4833065999999797513327645199999999999999999765---------------6559999999999999986


Q ss_pred             CCCCCCCCCCHHHCCC
Q ss_conf             8996566740210159
Q gi|254780896|r  336 SHSLLRLRTPSNFLER  351 (351)
Q Consensus       336 P~Gl~g~r~~~~~~~~  351 (351)
T Consensus       401 P~GLlp~~r~~~~~~~  416 (416)
T PRK11301        401 PQGLLPMTRPHLELKN  416 (416)
T ss_pred             CCCCCCCCCCCHHHCC
T ss_conf             9988998764313049