HHsearch results for GI: 254780896 and protein with PDBid: 2qi9_A
>2qi9_A Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=93.25 E-value=0.29 Score=23.98 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC-CHHHHHHHHHHHHHCCCCC---HH
Q ss_conf 9999996421222334202322367999998799999999999866440113543-1589999889887347422---38
Q gi|254780896|r 207 SNAWRTIRDNQKAFFSLNTTIIFAKLSAFAVSSAFIGMAGAFFAASRDRISPDMF-KFSENIIVISIVILGGMTS---LS 282 (351)
Q Consensus 207 G~~lrAv~~n~~aA~~~Ginv~~~~~~af~is~~lAgiaG~l~a~~~~~v~p~~~-~~~~~~~~~~~vvlGG~gs---~~ 282 (351)
.|++....-+||.|+.+|+|++|.|.....+++.+++.+=.. . .|-.| ++. ..-++- .+.|... ++
T Consensus 208 ~~~L~~l~lG~~~A~sLGv~v~~~r~~~l~~~~ll~a~~va~----~---G~I~FvGLi--~PhiaR-~~~g~~~~~~l~ 277 (326)
T 2qi9_A 208 SRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVAL----A---GAIGFIGLV--IPHILR-LSGLTDHRVLLP 277 (326)
T ss_dssp HHHHHHHHTCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH----H---CCCCSSTTH--HHHHHH-TTTCCSHHHHHH
T ss_pred HHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH----H---CHHHHHHHH--HHHHHH-HHCCCCCCHHHH
T ss_conf 988777636849888679858998899886889999999985----1---569999998--999999-862777436999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf -999999999999999987312210000123444202589999999999999858
Q gi|254780896|r 283 -KIAKATAILIGVVELCCGMNFYYFNSLLKFDCSFNMRHTTLMVIALFLVILMRS 336 (351)
Q Consensus 283 -Ga~lGa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lilvll~rP 336 (351)
-++.|+.++...+...+....+ ..........+++....+.++.|-
T Consensus 278 ~s~l~Ga~lll~aD~i~r~i~~p--------~eiPvGvitaliG~P~fi~Ll~r~ 324 (326)
T 2qi9_A 278 GCALAGASALLLADIVARLALAA--------AELPIGVVTATLGAPVFIWLLLKA 324 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSTT--------CCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC--------CCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999661466--------542199999999999999977204