HHsearch alignment for GI: 254780897 and conserved domain: PRK00059
>PRK00059 prsA peptidylprolyl isomerase; Provisional.
Probab=95.40 E-value=0.26 Score=29.12 Aligned_cols=106 Identities=10% Similarity=0.204 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-------HCCHHHHHHHHHH
Q ss_conf 878999977777669999999986400347999999997767899999975348640011-------0001345677899
Q gi|254780897|r 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV-------DSIDEEDLQYYHM 352 (473)
Q Consensus 280 ~l~~~~~~~~~~~~~~~i~~~L~~~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~~~-------~~~~e~~~~~~~~ 352 (473)
T Consensus 81 ~~~~~r~qvL~~LI~~~Ll~q~A~~~gl~vsd~ev~~~I~~~~~~~~~~---g~f~~~~y~~~L~~~g~t~~~~~----~ 153 (336)
T PRK00059 81 QLKQQKKQILESLITEKVLLQKAKELKLIPSDEELNKEVDKQVNEIKKQ---YNNDEEKFEEALKQTGFTEETFK----E 153 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHCCCCHHHHH----H
T ss_conf 9999999999999999999999998699849999999999999999883---79999999999998699999999----9
Q ss_pred HHHHHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHCCCCHH
Q ss_conf 999999999999999864--38742899999999999986399989
Q gi|254780897|r 353 LAKRRVLTGIVLGTIGEK--NNIEVTEEEMQSALYQQLGRFPGHEK 396 (473)
Q Consensus 353 ~Aek~vk~~lil~~Ia~~--e~I~vs~~Ei~~~i~~~~~~~~~~~~ 396 (473)
T Consensus 154 ~----~r~~l~~~~l~~~v~~~v~Vsd~Ei~~yY~~nk~~f~~~p~ 195 (336)
T PRK00059 154 Y----LKNQIIIEKVINEVVKDVKVTDKDAQKYYDENKSTFTEKPN 195 (336)
T ss_pred H----HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 9----99999999999997456865889999999997887337866