HHsearch alignment of GI: 254780897 and MMDB domain: 1t11_A_1-120

>1t11_A (A:1-120) Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae}
Probab=99.91  E-value=3.9e-23  Score=203.61  Aligned_cols=117  Identities=27%  Similarity=0.559  Sum_probs=112.8

Q ss_pred             CCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             91189972797699999854899999999999998750738985897048899998610899999999999999999998
Q gi|254780897|r    1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILS   80 (473)
Q Consensus         1 M~v~~~~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~~~~~ipGFRkGKvP~~ii~~~~g~~i~~e~~~~li~~~~~~~i~   80 (473)
                      |++++++.++|+++++|+||+++|+..+++++++++++++||||||||||+++|+++||++|++++++.+++.+|.++++
T Consensus         4 M~~~~~~~~~~~~~~~v~v~~~~~~~~~~k~~~~~~k~~~ipGFRkGKvP~~ii~~~~~~~i~~e~~~~li~~~~~~~l~   83 (120)
T 1t11_A            4 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKAVRQDVLGEVMQRHFIEAIV   83 (120)
T ss_dssp             CEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTTSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             15899987885899999987999999999999999711888998999888999999987999999999999999999985


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf             7299542287412222223332110137882057887622787762
Q gi|254780897|r   81 KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEI  126 (473)
Q Consensus        81 ~~~~~~~~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~~ev~Pei~l  126 (473)
                      +.++.|+++|.+...+         ++.+++|+|+++|+++|+|+|
T Consensus        84 e~~~~~i~~p~i~~~~---------~~~~~~~~~~~~~ev~Pei~l  120 (120)
T 1t11_A           84 KEKINPAGAPTFAPVE---------IGEGKDLVFTATFEVYPEVEL  120 (120)
T ss_dssp             HTTCCBSSCCEEEEEE---------CCTTSCEEEEEEEEBCCCCCC
T ss_pred             HCCCCCCCCCCCCCCC---------CCCCCCCEEECCCEECCCCCC
T ss_conf             2035777887534123---------456787124113111476543