HHsearch results for GI: 254780897 and protein with PDBid: 2p4v_A
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=90.53 E-value=0.41 Score=25.78 Aligned_cols=92 Identities=21% Similarity=0.277 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCC---------CCCCCHHHHCCC
Q ss_conf 15789999997643100002343322111134445666426534666544203651786---------656310342068
Q gi|254780897|r 143 EKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSA---------DLFSETTEILVG 213 (473)
Q Consensus 143 d~~Id~~i~~l~~~~~~~~~~~~~~~~gD~v~id~~~~~dg~~~~~~~~~~~~~~lg~~---------~~~~~f~~~liG 213 (473)
...++..|..|.........++.....+|.|.+.-...+.+. .+....+ ..+|.. +..--+-.+|+|
T Consensus 55 q~~~~~ri~~L~~~L~~a~ii~~~~~~~~~v~~gs~V~~~~~---~~~~~~~-~iVg~~ead~~~~~IS~~SPlG~ALlG 130 (158)
T 2p4v_A 55 LREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIEND---DGVTHRF-RIVGYDEIFGRKDYISIDSPMARALLK 130 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCEECCCCSSSCSSCSSSCEEEEECT---TCCCEEE-EBCCSTTCCSSSCCBCTTSHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC---CCCEEEE-EEECHHHHHCCCCEECCCCHHHHHHHC
T ss_conf 998999999999999863147875466664358659999725---8864899-985506541568857578989999708
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHC
Q ss_conf 87887543323444444410003873046761011002
Q gi|254780897|r 214 LKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251 (473)
Q Consensus 214 ~k~Gd~~~~~~~~P~d~~~~~laGk~v~f~v~v~~I~~ 251 (473)
+++||++++.+ |. | ...++|.+|.-
T Consensus 131 kk~Gd~V~v~~--p~--------G---~~~~~I~~I~y 155 (158)
T 2p4v_A 131 KEVGDLAVVNT--PA--------G---EASWYVNAIEY 155 (158)
T ss_dssp CCTTCEEEEEC--SS--------C---EEEEEEEEEEC
T ss_pred CCCCCEEEEEE--CC--------C---CEEEEEEEEEE
T ss_conf 99999899980--89--------8---78999999992