HHSEARCH alignment of GI: 254780897 and SCOP domain: d1q1ca1

Alignment

Probab=97.63  E-value=4.1e-05  Score=55.94  Aligned_cols=85  Identities=16%  Similarity=0.191  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEEEEE-ECCCCCCCCCC--CCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-----CCC
Q ss_conf             22111134445666-42653466654--42036517866563103420688788754332344444441000-----387
Q gi|254780897|r  167 SEIGDKVTVDYTVS-VDNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL-----AGK  238 (473)
Q Consensus       167 ~~~gD~v~id~~~~-~dg~~~~~~~~--~~~~~~lg~~~~~~~f~~~liG~k~Gd~~~~~~~~P~d~~~~~l-----aGk  238 (473)
                      ...||.|.++|.+. .||..|.....  .-+.|.+|.+.+++||+.+|.+|++|+...+.+....-|...-.     ++.
T Consensus        27 P~~gd~V~v~y~~~l~dG~~fdss~~~~~p~~f~~g~~~~i~G~~~~l~~M~~Ge~~~~~ip~~laYG~~g~~~~IPp~s  106 (120)
T d1q1ca1          27 PMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNA  106 (120)
T ss_dssp             CCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTC
T ss_pred             CCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEECHHHHCCCCCCCCCCCCCC
T ss_conf             98999999999999868979886204430013104887265652025154107968999999899677768888789399


Q ss_pred             CEEEEEEHHHHHC
Q ss_conf             3046761011002
Q gi|254780897|r  239 KVRLNFSIKEVFS  251 (473)
Q Consensus       239 ~v~f~v~v~~I~~  251 (473)
                      .+.|+|++.+|+.
T Consensus       107 ~LifeIeLl~v~~  119 (120)
T d1q1ca1         107 TLVFEVELFEFKG  119 (120)
T ss_dssp             CEEEEEEEEEEEC
T ss_pred             CEEEEEEEEEEEC
T ss_conf             2999999999857

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]