RPSBLAST alignment of GI: 254780897 and protein with PDBid: 1t11

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A Length = 392

 Score =  175 bits (444), Expect = 2e-44
 Identities = 82/405 (20%), Positives = 193/405 (47%), Gaps = 18/405 (4%)

Query: 1   MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
           MQV  +  EGL+R L++ +P+  + D+    + +I       GFR GKVP+  +  +YGK
Sbjct: 4   MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 63

Query: 61  SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
           ++  + + E+++    E + K     A  P+    E              DL    ++++
Sbjct: 64  AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEIGEGK---------DLVFTATFEV 114

Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
            P++E+   +++ V +   EV + ++   +  + K    ++  +  +E G +V++D+  S
Sbjct: 115 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 174

Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
           +D V  E    +N    +G+  +     + +VG   G +  I+  FPED+  ++L GK  
Sbjct: 175 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 234

Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
           +    + +V +     +N++   R G       A++    + +++  +  ++ ++K Q +
Sbjct: 235 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 294

Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
           + +  +    VP +L++ E N + Q+       A +   NV++  +   + +   AKRRV
Sbjct: 295 EGLVKENEIQVPSALIDQEINVLRQQA------AQRFGGNVEAAAQLPRELFEEQAKRRV 348

Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
           + G++LG +   + ++  EE++++ + +    +     +++ +++
Sbjct: 349 VVGLLLGEVIRTHELKADEEKVKALITEMATAYED-PSEVVSYYE 392