HHsearch alignment for GI: 254780898 and conserved domain: TIGR01244
>TIGR01244 TIGR01244 conserved hypothetical protein TIGR01244; InterPro: IPR005939 This is a family of largely hypothetical proteins of unknown function. .
Probab=99.62 E-value=1e-14 Score=112.94 Aligned_cols=117 Identities=24% Similarity=0.362 Sum_probs=101.5
Q ss_pred CCCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCC---CCCHHHHHHHHHCCCE-EEEEECCCCCCCCHHHHH
Q ss_conf 872502894771389998999999997499389973787876---5444579999966984-998752688898989999
Q gi|254780898|r 43 NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPE---SWHKEEEKAANDLGIQ-LINFPLSATRELNDEQIK 118 (207)
Q Consensus 43 Nf~~V~~g~lyRS~qP~~~~~~~l~k~~GIktIInLr~~~~~---~~~~~e~~~~~~~gi~-~i~ip~~~~~~~~~~~i~ 118 (207)
T Consensus 1 d~r~lte~-l~vsPQ~~~aD~a~a-A~lGf~tvInNRPD~Ee~~qp~~A~~~aaa~aAG~~Gy~H~Pv~~-g~~~pd~ve 77 (136)
T TIGR01244 1 DLRKLTED-LAVSPQVTKADIARA-ARLGFKTVINNRPDREEEEQPDSAAIKAAAEAAGLTGYLHLPVTA-GDLTPDDVE 77 (136)
T ss_pred CCCCCCCC-CEECCCCCHHHHHHH-HHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCC-CCCCHHHHH
T ss_conf 96422743-200478898889999-854636651068888888888728899999856888610054217-888762689
Q ss_pred HHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 9999994279949998289988899999999999839998999996
Q gi|254780898|r 119 QLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQ 164 (207)
Q Consensus 119 ~~~~il~~~~~PVlVHC~aG~~RTG~~~alyli~~~g~~~~eA~~e 164 (207)
T Consensus 78 ~fraa~~aA~~PVLA~CRsGT-Rss~lW~~~qA~-~G~p~eeiv~~ 121 (136)
T TIGR01244 78 TFRAALEAAESPVLAYCRSGT-RSSLLWALRQAA-EGVPVEEIVRR 121 (136)
T ss_pred HHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHC-CCCCHHHHHHH
T ss_conf 999999822898675314665-688999888631-79988999998