HHsearch alignment for GI: 254780898 and conserved domain: cd00047
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=98.54 E-value=7.5e-07 Score=63.48 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=70.8
Q ss_pred EEECCCCCH---HHHHHHHHHCCCCEEEECCCCCCC------CCCHHHHHH--HHH------------------------
Q ss_conf 771389998---999999997499389973787876------544457999--996------------------------
Q gi|254780898|r 52 IYRSAQPNG---TFIEYLKKEYGIKSILNLRGKLPE------SWHKEEEKA--AND------------------------ 96 (207)
Q Consensus 52 lyRS~qP~~---~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~~~--~~~------------------------ 96 (207)
T Consensus 43 fI~tQ~Pl~~T~~dFW~Mv~~~~v~~IVmL~~~~e~~~~kc~~YwP~~~~~~~~g~~~I~~~~~~~~~~~~~r~l~v~~~ 122 (231)
T cd00047 43 YIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVEKGREKCAQYWPEEEGSLTYGDITVTLVSEEKLDDYTVRTLKLSNT 122 (231)
T ss_pred EEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEECCCCCCCEEECCEEEEEEEEEECCCEEEEEEEEEEC
T ss_conf 99978997788999999998315856999313342671545302788998758656999999999669889999999989
Q ss_pred -----CCCEEEEEE-CCCCCCC-CHHHHHHHHHHHHC-----CCCCEEEECCCCCCHHHHHHHHHHHHH-----CCCCHH
Q ss_conf -----698499875-2688898-98999999999942-----799499982899888999999999998-----399989
Q gi|254780898|r 97 -----LGIQLINFP-LSATREL-NDEQIKQLISILKT-----APKPLLIHCKSGADRTGLASAVYLYIV-----AHYPKE 159 (207)
Q Consensus 97 -----~gi~~i~ip-~~~~~~~-~~~~i~~~~~il~~-----~~~PVlVHC~aG~~RTG~~~alyli~~-----~g~~~~ 159 (207)
T Consensus 123 ~~~~~r~v~h~~y~~Wpd~~~P~~~~~~l~l~~~v~~~~~~~~~~PivVHC~~G~gRsg~f~a~~~~~~~l~~~~~vdv~ 202 (231)
T cd00047 123 GTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIF 202 (231)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99967999999889999899579879999999999998516789999999699986545999999999999867998999
Q ss_pred HHHHHHHH-CCCCCC
Q ss_conf 99996100-026426
Q gi|254780898|r 160 EAHRQLSM-LYGHFP 173 (207)
Q Consensus 160 eA~~el~~-~ygh~~ 173 (207)
T Consensus 203 ~~v~~lR~qR~~~Vq 217 (231)
T cd00047 203 QTVKELRSQRPGMVQ 217 (231)
T ss_pred HHHHHHHHHCCCCCC
T ss_conf 999999873744039