HHsearch results for GI: 254780898 and protein with PDBid: 2c46_A
>2c46_A MRNA capping enzyme; guanylyltransferase, phosphatase, transferase, alternative splicing, hydrolase, mRNA processing, multifunctional enzyme; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=99.77 E-value=1.6e-17 Score=129.23 Aligned_cols=144 Identities=14% Similarity=0.203 Sum_probs=109.1
Q ss_pred HCCCCCCCCCCEEECCCC---------------CHHHHHHHHHHC--CCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEE
Q ss_conf 078725028947713899---------------989999999974--993899737878765444579999966984998
Q gi|254780898|r 41 TQNFHAVVPHEIYRSAQP---------------NGTFIEYLKKEY--GIKSILNLRGKLPESWHKEEEKAANDLGIQLIN 103 (207)
Q Consensus 41 ~~Nf~~V~~g~lyRS~qP---------------~~~~~~~l~k~~--GIktIInLr~~~~~~~~~~e~~~~~~~gi~~i~ 103 (207)
++-++.+++|++.-...| +++++....+.. +|..||||..... +|+ .+..++.||.|++
T Consensus 35 ~p~~g~~I~~~FIafK~Pl~~~~~~~i~~~~r~t~~~~~~~~~~~~~~iglVIDLTnt~r--~Yd--~~~~~~~gI~ylk 110 (241)
T 2c46_A 35 CPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSR--FYD--RNDIEKEGIKYIK 110 (241)
T ss_dssp SCSBCCCBTTTEEEECCCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEEEEEEECSSCSC--SSC--THHHHTTTCEEEE
T ss_pred CCCCCCCCCCCEEEECCCCHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCC--CCC--HHHHHHCCCEEEE
T ss_conf 998777768978871576701221138855449999999999983877059997879988--889--7888775906999
Q ss_pred EECCCC-CCCCHHHHHHHHHHHHC-----CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCH
Q ss_conf 752688-89898999999999942-----799499982899888999999999998399989999961000264267424
Q gi|254780898|r 104 FPLSAT-RELNDEQIKQLISILKT-----APKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSMLYGHFPVLKT 177 (207)
Q Consensus 104 ip~~~~-~~~~~~~i~~~~~il~~-----~~~PVlVHC~aG~~RTG~~~alyli~~~g~~~~eA~~el~~~ygh~~~~~~ 177 (207)
+++.+. .+|+.+.+..|+++++. .+++|+|||++|.+|||+++++|||...||+.++|+.++.-..++ +..+.
T Consensus 111 ip~~d~~~~P~~e~i~~F~~~v~~fl~~~~~~~V~VHC~~G~~RTg~li~aYLm~~~~~s~~eAi~~~~~~RP~-~i~k~ 189 (241)
T 2c46_A 111 LQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPP-GIYKG 189 (241)
T ss_dssp CCCCCTTCCCCHHHHHHHHHHHTTC-----CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSTT-CCCCH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC-CCCCH
T ss_conf 87079898979999999999999999838998699983969871899999999997299999999999987899-77998
Q ss_pred HHHHHHHHHHHH
Q ss_conf 599999999998
Q gi|254780898|r 178 ITMDITFEKITQ 189 (207)
Q Consensus 178 ~~ld~~~~~~~~ 189 (207)
..++.+++.+..
T Consensus 190 ~yl~~L~~~y~~ 201 (241)
T 2c46_A 190 DYLKELFRRYGD 201 (241)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999734