RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780898|ref|YP_003065311.1| hypothetical protein CLIBASIA_03975 [Candidatus Liberibacter asiaticus str. psy62] (207 letters) >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Length = 294 Score = 75.7 bits (186), Expect = 7e-15 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 13/134 (9%) Query: 43 NFHAVVPHEIYRSAQP-NGTFIEYLKKEYGIKSILNLRGKLPES-----WHKEEEKAAND 96 N++ + P + + ++ L+K G+K+I L+ + A Sbjct: 12 NYNFIRPD-LIVGSCLQTPEDVDKLRK-IGVKTIFCLQQDPDLEYFGVDISSIQAYAKKY 69 Query: 97 LGIQLINFPLSAT-----RELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLY 151 IQ I + R + L +K +H +G R + Y++ Sbjct: 70 SDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMF 129 Query: 152 IVAHYPKEEAHRQL 165 V Y EAH+ L Sbjct: 130 WVQGYKLMEAHKLL 143 >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* Length = 157 Score = 75.2 bits (184), Expect = 1e-14 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 6/138 (4%) Query: 43 NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLI 102 P ++ S PN LK + G+ ++NL + H +E K G+ + Sbjct: 14 ALQQQAP-QLLSSGLPNEQQFSLLK-QAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYV 71 Query: 103 NFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAH 162 P+ ++ ++ + K +L+HC + R + +Y + A Sbjct: 72 YIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCLANY-RASAFAYLYQ-LKQGQNPNMAQ 129 Query: 163 RQLSM--LYGHFPVLKTI 178 +P + + Sbjct: 130 TMTPWNDELAIYPKWQAL 147 >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics, phosphoprotein phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Length = 151 Score = 68.3 bits (166), Expect = 1e-12 Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 15/147 (10%) Query: 43 NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLI 102 NF V I+RS P+ +L+ G++SI+ L PE + + + GI+L Sbjct: 7 NFSMVDNG-IFRSGFPDSANFSFLQT-LGLRSIIYLC---PEPYPESNLQFLKSNGIRLF 61 Query: 103 NFPLSATRELNDEQIKQLI-----SILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYP 157 F + +E I +L P+LIHCK G RTG + + Sbjct: 62 QFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKL-QKWC 120 Query: 158 KEEAHRQLSMLYGHFPVLKTITMDITF 184 + Y F K D F Sbjct: 121 LTSIFDE----YQRFAAAKARVSDQRF 143 >2f46_A Hypothetical protein; 7380613, DUF442, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Length = 156 Score = 65.5 bits (159), Expect = 8e-12 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 6/117 (5%) Query: 51 EIYRSAQPNGTFIEYLKKEYGIKSILNLRG---KLPESWHKEEEKAANDLGIQLINFPLS 107 +Y S Q E + + GIK+I+ R + + + ++ G+ + Sbjct: 23 HLYISPQLTKADAEQIAQL-GIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPV 81 Query: 108 ATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQ 164 R++ ++ ++ A P+L +C++G R L P +E R+ Sbjct: 82 TARDIQKHDVETFRQLIGQAEYPVLAYCRTGT-RCSLLWGFRR-AAEGMPVDEIIRR 136 >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Length = 151 Score = 59.3 bits (143), Expect = 6e-10 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 12/127 (9%) Query: 43 NFHAVVPHEIYRSAQPNG-TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQL 101 NF V+P + A P ++L G++ +++L E + G+ L Sbjct: 8 NFSWVLPGRLAGLALPRLPAHYQFLLD-LGVRHLVSLT----ERGPPHSDSCP---GLTL 59 Query: 102 INFPLSATRELNDEQIKQLISILKTAPK---PLLIHCKSGADRTGLASAVYLYIVAHYPK 158 + +QI + + I+ A + +HC G RTG A YL Sbjct: 60 HRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAA 119 Query: 159 EEAHRQL 165 +A ++ Sbjct: 120 GDAIAEI 126 >2pt0_A MYO-inositol hexaphosphate phosphohydrolase; PTP, protein tyrosine phosphatase, phytase, P-loop, cysteine-sulfonic acid, oxidized thiol.; 1.70A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 2psz_A 3d1h_A 3d1o_A 3d1q_A 1u24_A 1u25_A* 1u26_A* 2b4o_A 2b4p_A 2b4u_A Length = 340 Score = 54.2 bits (130), Expect = 2e-08 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 15/120 (12%) Query: 80 GKLPESWH-------KEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTAPK--P 130 KLPE + E++ A G++ + E I + ++ +T P+ Sbjct: 182 HKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYRTLPQDAW 241 Query: 131 LLIHCKSGADRTGLASAVYLYIVAHYPKEEAH----RQLSMLYGHFPVLKTITMDITFEK 186 L HC++G RT + + P RQ + ++ T D K Sbjct: 242 LHFHCEAGVGRTTAFMV--MTDMLKNPSVSLKDILYRQHEIGGFYYGEFPIKTKDKDSWK 299 >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 2i6o_A* 2dxp_A* 2i6p_A* Length = 161 Score = 53.7 bits (128), Expect = 3e-08 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 6/126 (4%) Query: 45 HAVVPHEIYRSAQPNG-TFIEYLKKEYGIKSILNLR--GKLPESWHKEE--EKAANDLGI 99 + V I S P I +KE G+K +L L ++ ESW ++ G+ Sbjct: 2 YWVRRKTIGGSGLPYTENEILEWRKE-GVKRVLVLPEDWEIEESWGDKDYYLSILKKNGL 60 Query: 100 QLINFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKE 159 Q ++ P+ +D Q ++ L + + L+HC G RTG A YL + E Sbjct: 61 QPLHIPIPDGGVPSDSQFLTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVE 120 Query: 160 EAHRQL 165 A ++ Sbjct: 121 SAIDEV 126 >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Length = 212 Score = 52.3 bits (125), Expect = 8e-08 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 18/132 (13%) Query: 24 VLCAVSLGLYFLTITTFTQNFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLP 83 V C+ LGL L F ++ R+ Q + E LK GI+ I + Sbjct: 37 VNCSQFLGLCALPGCKF---------KDVRRNVQKD---TEELKSC-GIQDIFVFCTRGE 83 Query: 84 ESWHK--EEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTA---PKPLLIHCKSG 138 S ++ GI + P++ + +++ L T + LIH G Sbjct: 84 LSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGG 143 Query: 139 ADRTGLASAVYL 150 R+ L +A L Sbjct: 144 LGRSCLVAACLL 155 >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Length = 348 Score = 51.5 bits (123), Expect = 1e-07 Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 62 FIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLI 121 +I+Y K + + +I+ L + + A G + + D +K+ + Sbjct: 210 YIQYFKN-HNVTTIIRLNK---RMYDAKRFTDA---GFDHHDLFFADGSTPTDAIVKEFL 262 Query: 122 SILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 I + A + +H K+G RTG A Y+ E + Sbjct: 263 DICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWV 306 >1zcl_A Protein tyrosine phosphatase 4A1; PRL-1 PTP4A dual specific phosphatase, hydrolase; 2.90A {Rattus norvegicus} PDB: 1x24_A Length = 180 Score = 48.8 bits (116), Expect = 9e-07 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 61 TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQL 120 FIE LKK YG+ +I+ + ++ + GI ++++P +++ + Sbjct: 52 KFIEELKK-YGVTTIVRV---CEATYDTTLVEKE---GIHVLDWPFDDGAPPSNQIVDDW 104 Query: 121 ISILKT-----APKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 +S++K + +H +G R + A+ L I E+A + + Sbjct: 105 LSLVKIKFREEPGCCIAVHSVAGLGRAPVLVALAL-IEGGMKYEDAVQFI 153 >3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} PDB: 1vhr_A* 1j4x_A* Length = 183 Score = 46.7 bits (110), Expect = 4e-06 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 7/130 (5%) Query: 41 TQNFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQ 100 +Q + V P IY I L+K GI +LN D GI Sbjct: 25 SQPCNEVTPR-IYVGNASVAQDIPKLQK-LGITHVLNAAEGRSFMHVNTNANFYKDSGIT 82 Query: 101 LINFPLSATRELN-----DEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAH 155 + + T+E N + + L +L+HC+ G R+ YL + Sbjct: 83 YLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQK 142 Query: 156 YPKEEAHRQL 165 + A + Sbjct: 143 MDVKSALSIV 152 >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA; 1.67A {Homo sapiens} Length = 151 Score = 45.1 bits (106), Expect = 1e-05 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 5/124 (4%) Query: 45 HA--VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAAND-LGIQL 101 HA V P +Y Q L++ GI +LN + E LG++ Sbjct: 1 HADEVWPG-LYLGDQDMANNRRELRR-LGITHVLNASHSRWRGTPEAYEGLGIRYLGVEA 58 Query: 102 INFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEA 161 + P + L +L+HC G R+ YL + H EA Sbjct: 59 HDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEA 118 Query: 162 HRQL 165 +++ Sbjct: 119 IKKV 122 >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Length = 159 Score = 42.3 bits (99), Expect = 8e-05 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 13/112 (11%) Query: 61 TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQL 120 FIE LKK YG+ +I+ + ++ E+E GI ++++P +++ + Sbjct: 31 KFIEELKK-YGVTTIVRVCEATYDTTLVEKE------GIHVLDWPFDDGAPPSNQIVDDW 83 Query: 121 ISILKT-----APKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSM 167 +S++K + +HC +G R + A+ L I E+A + + Sbjct: 84 LSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALAL-IEGGMKYEDAVQFIRQ 134 >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* Length = 296 Score = 42.1 bits (98), Expect = 9e-05 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 54/160 (33%) Query: 46 AVVPHEIYRSAQPNGTFIEYLKK--EYGIKSILNLRGKLPESWHKEEEKAANDLGIQLIN 103 A+ P ++RS++ + GI + +LR E + + + + + L+ Sbjct: 41 ALRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSS-REVARRGPGRVPDGIDVHLLP 99 Query: 104 FPLSA--------------------------------------------------TRELN 113 FP A TR Sbjct: 100 FPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGA 159 Query: 114 DEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIV 153 + +++++L A +P+L HC +G DRTG A+ L V Sbjct: 160 QRALHRVVTLLA-AGRPVLTHCFAGKDRTGFVVALVLEAV 198 >2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A Length = 205 Score = 41.3 bits (96), Expect = 1e-04 Identities = 17/127 (13%), Positives = 36/127 (28%), Gaps = 9/127 (7%) Query: 44 FHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLIN 103 V P ++ L + GI ++N K + ++ Sbjct: 46 IDEVWPS-LFLGDAYAARDKSKLIQ-LGITHVVNAAAGKF--QVDTGAKFYRGMSLEYYG 101 Query: 104 FPLSATRELN-----DEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPK 158 + + + + L +L+HC G R+ +L I + Sbjct: 102 IEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTL 161 Query: 159 EEAHRQL 165 EA + + Sbjct: 162 VEAIQTV 168 >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specificity phosphatase; 1.88A {Homo sapiens} Length = 190 Score = 40.5 bits (94), Expect = 3e-04 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 7/119 (5%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 + ++ + L+ GI I+N ++P + E + + L + P Sbjct: 29 ITSS-LFLGRGSVASNRHLLQA-RGITCIVNATIEIPNFNWPQFEY----VKVPLADMPH 82 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 + + + I + L+HC +G R+ YL + EA+ + Sbjct: 83 APIGLY-FDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWV 140 >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} Length = 629 Score = 39.9 bits (93), Expect = 4e-04 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%) Query: 88 KEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTAPKP--LLIHCKSGADRTGLA 145 + EE+ G L +D + + + K+ PK L HC +G RT + Sbjct: 190 RTEEEMVKQHGANYFRLTLQDHFRPDDPDVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIF 249 Query: 146 SAVYLYIVAHYPKEEAH 162 ++ I+ + Sbjct: 250 MVMHD-ILKNAKDVSFD 265 Score = 37.2 bits (86), Expect = 0.002 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Query: 90 EEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTAPKP--LLIHCKSGADRTGLASA 147 E++ G+ + + I + I+ +T P L HC++GA RT A Sbjct: 490 EQQLVEKNGLHYYRIAATDHIWPSAANIDEFINFTRTMPANAWLHFHCQAGAGRTTAYMA 549 Query: 148 VY 149 +Y Sbjct: 550 MY 551 >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Length = 154 Score = 40.1 bits (93), Expect = 4e-04 Identities = 13/102 (12%), Positives = 33/102 (32%), Gaps = 8/102 (7%) Query: 68 KEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL----SATRELNDEQIKQLISI 123 +++GI I+ +R + ++ K + + + + K+ I Sbjct: 30 QKHGITHIICIRQNIEANFIKPNFQQ----LFRYLVLDIADNPVENIIRFFPMTKEFIDG 85 Query: 124 LKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 +L+H +G R+ Y+ +A + Sbjct: 86 SLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYV 127 >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 1mkp_A Length = 155 Score = 39.4 bits (91), Expect = 7e-04 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 5/119 (4%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++P+ +Y + + +E L K GI+ ILN+ LP + K + + I + + Sbjct: 9 ILPN-LYLGSARDSANLESLAK-LGIRYILNVTPNLPNFFEKNGDF--HYKQIPISDHW- 63 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 S + + I + +L+H +G R+ + YL H +A+ + Sbjct: 64 SQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 122 >2c46_A MRNA capping enzyme; guanylyltransferase, phosphatase, transferase, alternative splicing, hydrolase, mRNA processing, multifunctional enzyme; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Length = 241 Score = 38.8 bits (90), Expect = 8e-04 Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 19/121 (15%) Query: 62 FIEYLKKEYG-IKSILNL----RGKLPESWHKEEEKAANDLGIQLINFPLSATREL-NDE 115 YLK + +++L R KE GI+ I E E Sbjct: 72 LSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKE--------GIKYIKLQCKGHGECPTTE 123 Query: 116 QIKQLISIL-----KTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSMLYG 170 + I + + P+ + +HC G +RTG +L + E A + Sbjct: 124 NTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARP 183 Query: 171 H 171 Sbjct: 184 P 184 >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} Length = 211 Score = 38.2 bits (88), Expect = 0.001 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 7/119 (5%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++P +Y + + + E+L I ++LN+ + E+ I + + Sbjct: 9 ILPF-LYLGSAYHASKCEFLAN-LHITALLNVSRRTSEACMTHLHY----KWIPVEDSHT 62 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 + E I + + + K +L+H ++G R+ YL + +EA + Sbjct: 63 ADISSHFQEAIDFIDCVREKGGK-VLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYI 120 >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Length = 145 Score = 37.8 bits (87), Expect = 0.002 Identities = 20/119 (16%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 + H ++ ++ N + +E L+ G++ ILN+ ++ + E I++ + Sbjct: 7 IFEH-VFLGSEWNASNLEDLQN-RGVRYILNVTREIDNFFPGVFEY----HNIRVYDEEA 60 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 + + IS K L+H K G R+ Y + + A+ + Sbjct: 61 TDLLA-YWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYV 118 >2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B Length = 182 Score = 37.3 bits (86), Expect = 0.002 Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 15/121 (12%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 V+P +IY ++P +K+ ++N+ + + ++ ++ Sbjct: 47 VLPEKIYLYSEPT------VKELLPFDVVINVAEEANDLRM-------QVPAVEYHHYRW 93 Query: 107 SATRELND--EQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQ 164 ++ + +I T + +LIH + G R+ Y+ + ++ Sbjct: 94 EHDSQIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDL 153 Query: 165 L 165 L Sbjct: 154 L 154 >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} Length = 161 Score = 35.9 bits (82), Expect = 0.007 Identities = 17/121 (14%), Positives = 42/121 (34%), Gaps = 11/121 (9%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++ + I+ + N ++Y+ I SIL + ++P + + I ++ Sbjct: 13 IIQY-IHLGSFLNAHNVDYIHN-NNISSILLVGIEVPSLFK-------DQCDILRLDIVS 63 Query: 107 SATRELND--EQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQ 164 +L D + I + +LI +G ++ +L A + Sbjct: 64 EEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNK 123 Query: 165 L 165 + Sbjct: 124 V 124 >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Length = 164 Score = 35.2 bits (80), Expect = 0.012 Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 7/123 (5%) Query: 43 NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLI 102 F V P ++ E L + GI +N+ + P + L + + Sbjct: 11 PFARVAPA-LFIGNARAAGATELLVR-AGITLCVNVSRQQPGPRAPGVAE----LRVPVF 64 Query: 103 NFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAH 162 + P + + E + L++CK+G R+ YL + + A Sbjct: 65 DDP-AEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAF 123 Query: 163 RQL 165 + + Sbjct: 124 QMV 126 >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Length = 176 Score = 34.9 bits (80), Expect = 0.013 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 13/101 (12%) Query: 68 KEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELND----EQIKQLISI 123 E K +LNL ++ + I +I+ PL + + + +S Sbjct: 53 SEVKFKYVLNL---------TMDKYTLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSK 103 Query: 124 LKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQ 164 +P+L+H +G +R+G YL + Sbjct: 104 CDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFL 144 >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A Length = 144 Score = 34.7 bits (79), Expect = 0.016 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++P +Y + + + L GI ++LN+ P + E I + + Sbjct: 7 ILPF-LYLGSAYHAARRDMLDA-LGITALLNVSSDCPNHF----EGHYQYKCIPVEDNHK 60 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 + E I+ + ++ + L +H ++G R+ YL + EEA + Sbjct: 61 ADISSWFMEAIEYIDAVKDCRGRVL-VHSQAGISRSATICLAYLMMKKRVRLEEAFEFV 118 >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} Length = 149 Score = 34.4 bits (78), Expect = 0.020 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++P ++ + + ++ +++ I ++N+ LP +++ N + + Sbjct: 7 ILPF-LFLGNEQDAQDLDTMQR-LNIGYVINVTTHLPLYHYEKGLF--NYKRLPATDSN- 61 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 E+ + I K LLIHC++G R+ YL +A++ + Sbjct: 62 KQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 120 >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Length = 169 Score = 34.2 bits (78), Expect = 0.020 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 9/112 (8%) Query: 61 TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQL 120 T + +K+ I +I++L +A G+ + + +++ Sbjct: 45 TAEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRA----GLLYKKIQVPGQTLPPESIVQEF 100 Query: 121 ISIL-----KTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSM 167 I + K + +HC G +RTG YL +EA + Sbjct: 101 IDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEK 152 >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Length = 188 Score = 33.5 bits (76), Expect = 0.034 Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 7/119 (5%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 + +Y S L I ++N+ ++ + +++ + + + + + P Sbjct: 23 ITKS-LYISNGVAANNKLMLSS-NQITMVINVSVEVVNTLYEDIQY----MQVPVADSPN 76 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 S + D + S+ + L+HC +G R+ YL +AH Sbjct: 77 SRLCDFFDPIADHIHSVEMKQGR-TLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWT 134 >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, PSI-2, protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Length = 195 Score = 32.7 bits (74), Expect = 0.067 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 5/83 (6%) Query: 68 KEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTA 127 E K +LNL N + I L++ + + D+ L + Sbjct: 70 SEVKFKYVLNLTMDKY----TLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRN 125 Query: 128 PKPLLIHCKSGADRTGLASAVYL 150 +L+HC +G +R+G YL Sbjct: 126 EP-VLVHCAAGVNRSGAMILAYL 147 >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Length = 177 Score = 32.4 bits (73), Expect = 0.072 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 ++P ++ + + ++ +++ I ++N+ LP +++ L N Sbjct: 11 ILPF-LFLGNEQDAQDLDTMQR-LNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSN--- 65 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 E+ + I K LLIHC++G R+ YL +A++ + Sbjct: 66 KQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 124 >1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein, gene regulation; 2.90A {Aquifex aeolicus VF5} SCOP: b.34.14.1 c.55.3.10 PDB: 2f8s_A 2f8t_A 2nub_A Length = 706 Score = 30.3 bits (68), Expect = 0.36 Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 8/75 (10%) Query: 61 TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLG------IQLINFPLSATRELND 114 F +++ +L ++ E+ L ++ L+ L D Sbjct: 209 FFRLCMERSTHKS-SKKAWEELLKNRELREKAFLVVLEKGYTYPATILKPVLTYE-NLED 266 Query: 115 EQIKQLISILKTAPK 129 E+ ++ I++ P Sbjct: 267 EERNEVADIVRMEPG 281 >2nlk_A Protein tyrosine phosphatase, receptor type, G variant (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1249, HPTPG, RPTPG; 2.40A {Homo sapiens} Length = 627 Score = 30.1 bits (67), Expect = 0.40 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 105 PLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTG 143 P+S+T EL I + T P ++H + GA G Sbjct: 500 PISSTFEL----INVIKEEALTRDGPTIVHDEYGAVSAG 534 >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Length = 165 Score = 29.8 bits (66), Expect = 0.44 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 8/123 (6%) Query: 43 NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLI 102 + ++P +Y + E L K + IL++ + Sbjct: 6 GMNKILPG-LYIGNFKDARDAEQLSK-NKVTHILSVHDSARPMLEGVKYL------CIPA 57 Query: 103 NFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAH 162 S + ++ + I + + L+HC +G R+ Y+ V + E+A Sbjct: 58 ADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDAL 117 Query: 163 RQL 165 + Sbjct: 118 HTV 120 >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 Score = 29.3 bits (65), Expect = 0.58 Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 15/104 (14%) Query: 63 IEYLKKEYGIK-SILNLRGKLPESWHKEEEKAANDLGIQLINFPL----SATRELNDEQI 117 +L + ++ NL K + ++ + + Sbjct: 53 RSFLDSRHLDHYTVYNLSPKSYRT---------AKFHSRVSECSWPIRQAPSLHNLFAVC 103 Query: 118 KQLISILKTAPK-PLLIHCKSGADRTGLASAVYLYIVAHYPKEE 160 + + + L PK ++HC G + + Y Sbjct: 104 RNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPG 147 >1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Length = 272 Score = 29.1 bits (64), Expect = 0.78 Identities = 11/86 (12%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Query: 88 KEEEKAANDLGIQLINF--PLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLA 145 +E A+ + +I + P++ + + ++Q + +T +L+ + +T LA Sbjct: 22 TNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALA 81 Query: 146 SAVYLYIVAHYPKEEAHRQLSMLYGH 171 + + + K + ++ Sbjct: 82 AKIAEESNFPFIKICSPDKMIGFSET 107 >3eol_A Isocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3e5b_A Length = 433 Score = 28.4 bits (63), Expect = 1.2 Identities = 7/47 (14%), Positives = 17/47 (36%) Query: 67 KKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELN 113 Y N + L ++ + ++ +G + L+ +LN Sbjct: 309 LLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHQLN 355 >2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae} Length = 424 Score = 28.0 bits (61), Expect = 1.6 Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 8/71 (11%) Query: 62 FIEYLKKEYGIKSILNLRGKLPE-----SWHKEEEKAANDLGIQLINFPLSATRELNDEQ 116 +E LK E G+ + E L ++++ P + D+ Sbjct: 315 VMEVLKAE-GVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGT--AIGDDD 371 Query: 117 IKQLISILKTA 127 I+++ +L+ Sbjct: 372 IRRVADLLRLC 382 >2jjd_A Receptor-type tyrosine-protein phosphatase epsilon; transmembrane, phosphoprotein, alternative splicing, consortium, structural, glycoprotein, SGC; 3.20A {Homo sapiens} Length = 599 Score = 27.8 bits (61), Expect = 1.6 Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 125 KTAPKPLLIHCKSGADRTG 143 +T P+ +HC +GA RTG Sbjct: 515 QTGNHPITVHCSAGAGRTG 533 >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* Length = 610 Score = 27.8 bits (61), Expect = 1.8 Identities = 10/29 (34%), Positives = 13/29 (44%) Query: 115 EQIKQLISILKTAPKPLLIHCKSGADRTG 143 Q PLLIHC+ G+ +TG Sbjct: 526 PQKNSSEGNKHHKSTPLLIHCRDGSQQTG 554 >3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Score = 27.3 bits (60), Expect = 2.4 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 4/53 (7%) Query: 152 IVAHYPKEEAHRQLSMLYGHFPVL--KTITMDITFEKITQLYPNN--VSKGDT 200 I+A K E R L + G + ++ L + GD Sbjct: 458 IIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDF 510 >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 Score = 27.3 bits (60), Expect = 2.7 Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 14/104 (13%) Query: 63 IEYLKKEYGIK-SILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLI 121 + +L ++ I NL E ++ +P E IK Sbjct: 48 VRFLDSKHKNHYKIYNLCA--------ERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFC 99 Query: 122 SILKTAPK-----PLLIHCKSGADRTGLASAVYLYIVAHYPKEE 160 L IHCK+G RTG+ YL + K + Sbjct: 100 EDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQ 143 >3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* 2vgi_A* Length = 550 Score = 27.1 bits (59), Expect = 2.7 Identities = 9/37 (24%), Positives = 15/37 (40%) Query: 152 IVAHYPKEEAHRQLSMLYGHFPVLKTITMDITFEKIT 188 I+A + RQ + G FPVL + + + Sbjct: 469 IIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDV 505 >1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A Length = 306 Score = 27.0 bits (59), Expect = 2.8 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 6/56 (10%) Query: 113 NDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSML 168 N + K ++ + +IH ++G RT I A + + QLS+ Sbjct: 219 NMYESKGSSAVADDSKLRPVIHSRAGVGRTA------QLIGAMCMNDSRNSQLSVE 268 >2wjy_A Regulator of nonsense transcripts 1; alternative splicing, nonsense mediated decay, zinc-finger, ATP-binding, polymorphism, metal-binding, UPF2; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A Length = 800 Score = 27.1 bits (59), Expect = 3.0 Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 2/55 (3%) Query: 104 FPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPK 158 F +LN Q+ + ++L LI G +T ++ + ++ Sbjct: 349 FTAQGLPDLNHSQVYAVKTVL--QRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 401 >3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A* Length = 367 Score = 27.1 bits (60), Expect = 3.3 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 25/77 (32%) Query: 62 FIEYLKKEYGI-------------KSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSA 108 LK G+ ++ + + KLP +KAA Q+++ P+ Sbjct: 294 VQASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVG-----DKAAT----QVMSLPMHP 343 Query: 109 TRELNDEQIKQLISILK 125 L+ IK + + L Sbjct: 344 --YLDTASIKIICAALT 358 >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Length = 160 Score = 26.7 bits (58), Expect = 3.5 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 8/119 (6%) Query: 47 VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106 V+P +Y + ++ L + I I+++ L I + + P Sbjct: 11 VLPG-LYLGNFIDAKDLDQLGR-NKITHIISIHESPQPLLQD-----ITYLRIPVADTPE 63 Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165 ++ E I + L+H +G R+ Y+ V + + Sbjct: 64 VPIKKHFKE-CINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAI 121 >1igw_A Isocitrate lyase; beta barrel; 2.10A {Escherichia coli} SCOP: c.1.12.7 PDB: 3i4e_A Length = 434 Score = 26.8 bits (59), Expect = 3.8 Identities = 6/45 (13%), Positives = 15/45 (33%) Query: 69 EYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELN 113 Y N + L + ++ +D+G + L+ + Sbjct: 315 AYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMW 359 >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Score = 26.7 bits (58), Expect = 3.8 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 17/89 (19%) Query: 37 ITTFTQNFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKA--- 93 I T + H+ V + A PN L +Y + ++ ++ + W + E +A Sbjct: 1226 ILTTAREHHSSVKY-----ASPN------LNMKYRKRQLVTREAQI-KDWVENELEALKL 1273 Query: 94 -ANDLGIQLIN-FPLSATRELNDEQIKQL 120 A ++ + N F L TRE+++E QL Sbjct: 1274 EAEEIPSEDQNEFLLERTREIHNEAESQL 1302 >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A Length = 575 Score = 26.6 bits (58), Expect = 3.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Query: 130 PLLIHCKSGADRTG 143 P+ +HC +G RTG Sbjct: 502 PITVHCSAGVGRTG 515 >3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae} Length = 505 Score = 26.6 bits (58), Expect = 3.9 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 6/78 (7%) Query: 54 RSAQPNGTFIEYLKKEYGIKSILNLRGKLPE-----SWHKEEEKAANDLGIQLINFPLSA 108 S + K+ YG ++NL + ++ A ND I + F Sbjct: 281 NSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHH 340 Query: 109 -TRELNDEQIKQLISILK 125 R++ ++K LI L+ Sbjct: 341 ECRKMQWHRVKLLIDHLE 358 >3khd_A Pyruvate kinase; malaria, structural genomics, structural genomics consortium, SGC; 2.70A {Plasmodium falciparum 3D7} Length = 520 Score = 26.5 bits (58), Expect = 4.1 Identities = 8/53 (15%), Positives = 17/53 (32%), Gaps = 4/53 (7%) Query: 152 IVAHYPKEEAHRQLSMLYGHFPVL--KTITMDITFEKITQLYPNN--VSKGDT 200 I+A + + L++ G + DI ++ GD+ Sbjct: 444 ILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDS 496 >2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 PDB: 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A Length = 525 Score = 26.5 bits (58), Expect = 4.4 Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 128 PKPLLIHCKSGADRTG 143 P+++HC +G RTG Sbjct: 452 AGPVVVHCSAGIGRTG 467 >3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, structural genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Score = 26.3 bits (57), Expect = 5.3 Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 152 IVAHYPKEEAHRQLSMLYGHFPVL--KTITMDITFEKITQLYPNN--VSKGDT 200 I+A E + L ++ G + D + V++G++ Sbjct: 435 ILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGES 487 >1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B* Length = 1054 Score = 26.2 bits (57), Expect = 5.4 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%) Query: 79 RGKLPESWHKEEEKAANDLGIQLINFPLSATR---------ELNDEQIKQLISILKTAPK 129 RG L S ++ +L QL+NF + ++R +NDE I L SIL+ Sbjct: 217 RGCLMVSTATAKKGKKAELFRQLLNFDIGSSRITVRNVEDVAVNDESISTLSSILEKLGT 276 Query: 130 PLLIHCKSGAD 140 +I+ ++G + Sbjct: 277 GGIIYARTGEE 287 >2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* Length = 532 Score = 26.1 bits (57), Expect = 5.5 Identities = 7/14 (50%), Positives = 11/14 (78%) Query: 130 PLLIHCKSGADRTG 143 P+++HC +G RTG Sbjct: 448 PIIVHCSAGIGRTG 461 >2nq2_A Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} Length = 337 Score = 26.3 bits (57), Expect = 5.7 Identities = 7/39 (17%), Positives = 20/39 (51%) Query: 4 IKKPRKNLLIFYIKILLGVLVLCAVSLGLYFLTITTFTQ 42 ++ ++F + +LL + + ++ +G Y L++ Q Sbjct: 1 MQPDSYPKILFGLTLLLVITAVISLGIGRYSLSVPQIGQ 39 >1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2 Length = 193 Score = 26.1 bits (56), Expect = 5.9 Identities = 8/25 (32%), Positives = 12/25 (48%) Query: 98 GIQLINFPLSATRELNDEQIKQLIS 122 GI++ N P +LN E I + Sbjct: 168 GIEVFNVPKKNLNKLNWENINEFCG 192 >2gml_A Ribosomal large subunit pseudouridine synthase F; RLUF, ribosome, RNA modifying enzyme, isomerase; 2.60A {Escherichia coli} Length = 237 Score = 25.8 bits (56), Expect = 6.8 Identities = 7/33 (21%), Positives = 16/33 (48%) Query: 98 GIQLINFPLSATRELNDEQIKQLISILKTAPKP 130 + L PL R+L D+++ L +++ + Sbjct: 157 NVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 189 >3bem_A Putative NAD(P)H nitroreductase YDFN; 2632848, putative nitroreductase YDFN, structural genomics, joint center for structural genomics, JCSG; HET: MSE FMN; 1.65A {Bacillus subtilis} Length = 218 Score = 25.7 bits (55), Expect = 7.9 Identities = 10/97 (10%), Positives = 27/97 (27%), Gaps = 8/97 (8%) Query: 108 ATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSM 167 + + E + ++ ++ AP S + L ++A Sbjct: 31 SGHPITKEDLNEMFELVALAP--------SAFNLQHTKYVTVLDQDVKEKLKQAANGQYK 82 Query: 168 LYGHFPVLKTITMDITFEKITQLYPNNVSKGDTEQPM 204 + VL + +++ +Y G + Sbjct: 83 VVSSSAVLLVLGDKQAYQQAADIYEGLKVLGILNKQE 119 >1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Score = 25.6 bits (56), Expect = 8.9 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 4/53 (7%) Query: 152 IVAHYPKEEAHRQLSMLYGHFPVL--KTITMDITFEKITQLYPNN--VSKGDT 200 I+A E+ QL + G P L + + D + +L + KGD Sbjct: 396 ILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDV 448 >3dh3_A Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli} Length = 290 Score = 25.5 bits (55), Expect = 8.9 Identities = 7/33 (21%), Positives = 16/33 (48%) Query: 98 GIQLINFPLSATRELNDEQIKQLISILKTAPKP 130 + L PL R+L D+++ L +++ + Sbjct: 210 NVSLSGIPLGEWRDLTDDELIDLFKLIENSSSE 242 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.321 0.138 0.399 Gapped Lambda K H 0.267 0.0619 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 1,724,130 Number of extensions: 75249 Number of successful extensions: 420 Number of sequences better than 10.0: 1 Number of HSP's gapped: 399 Number of HSP's successfully gapped: 82 Length of query: 207 Length of database: 5,693,230 Length adjustment: 88 Effective length of query: 119 Effective length of database: 3,559,758 Effective search space: 423611202 Effective search space used: 423611202 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 54 (24.8 bits)