HHsearch results for GI: 254780899 and protein with PDBid: 2q8k_A
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcription; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=96.73 E-value=0.0038 Score=39.83 Aligned_cols=81 Identities=15% Similarity=0.268 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CC-----
Q ss_conf 9999999999999999997579988999999999999985983034433244455323446421112------12-----
Q gi|254780899|r 22 NIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHG------IP----- 90 (273)
Q Consensus 22 ~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~------~p----- 90 (273)
..+...+.+..+++++.+.++||++..|+...+++.+.+.|..+- .++.| -+....+.|+ .|
T Consensus 145 ~~~~l~~aa~~a~~~ai~~vkPG~~~~ei~~ai~~v~~~~g~~~v-~~~~g------H~ig~~~~~~~~~I~~~p~~~~~ 217 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI-EGMLS------HQLKQHVIDGEKTIIQNPTDQQK 217 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEEC-TTCEE------EEEBTTBSSCSCEEESSCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC-CCCCC------CCCCCEEECCCCEECCCCCCCCC
T ss_conf 999999999998764454137884034058999887885598433-47655------66522672698663568986545
Q ss_pred ---CCCCCCCCEEEEEEEEEEE
Q ss_conf ---2220013405799787665
Q gi|254780899|r 91 ---SNKQLREGDIVNVDVTYVV 109 (273)
Q Consensus 91 ---~d~~l~~GD~v~iD~g~~~ 109 (273)
....|++|+++.||.+...
T Consensus 218 ~~~~~~~le~G~V~aIEp~vst 239 (401)
T 2q8k_A 218 KDHEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp HHSCCCBCCTTCEEEEEEEEES
T ss_pred CCCCCCEEEECCEEEEEEEECC
T ss_conf 7898738996818878754305