RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780899|ref|YP_003065312.1| methionine aminopeptidase [Candidatus Liberibacter asiaticus str. psy62] (273 letters) >gnl|CDD|29971 cd01086, MetAP1, Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.. Length = 238 Score = 329 bits (846), Expect = 5e-91 Identities = 122/240 (50%), Positives = 165/240 (68%), Gaps = 2/240 (0%) Query: 20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCT 79 +E +R A +VA LD L IKPG TT+E+D +F E+ A PA L Y G+ KS CT Sbjct: 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60 Query: 80 SINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYES 139 S+N V+CHGIP ++ L++GDIVN+DV ++G+HGDS+R + VG++ A+++++VT E+ Sbjct: 61 SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120 Query: 140 LYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYP 199 LYKGI AVK I DIG AI++YA YSVV F GHGIG+ FHE+P+I ++ P Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGRKFHEEPQIPNYGRPG-- 178 Query: 200 SVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGITKAGCEIFTL 259 + + GMVFTIEPM+N+G L DGWT VT+D SLSAQ+EHT+ IT+ G EI TL Sbjct: 179 TGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 >gnl|CDD|30374 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]. Length = 255 Score = 307 bits (787), Expect = 3e-84 Identities = 115/257 (44%), Positives = 158/257 (61%), Gaps = 5/257 (1%) Query: 10 GSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLN 69 I+I TPEE+E +R A + A+ L + ++KPG TT E+D+ +F E A PA L Sbjct: 1 MMISIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLG 60 Query: 70 YRGYKKSCCTSINHVICHGIPSNKQ-LREGDIVNVDVTYVVNGWHGDSSRMYPVG-KIKR 127 Y+G+ C S+N V+ HGIP +K+ L+EGDIV +DV ++G+ GD++ + VG Sbjct: 61 YKGFPFPTCISVNEVVAHGIPGDKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDE 120 Query: 128 AAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEK 187 A+R+L+ T E+LY GI AVK A + DIG+AIQ YA S +SVV GHGIG+ HE+ Sbjct: 121 DAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVVRNLTGHGIGRELHEE 180 Query: 188 PEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLS-DGWTAVTRDRSLSAQYEHT 246 P I ++ +EGMVF IEPM+N G D WT VT+D SLSAQ+EHT Sbjct: 181 PSIPNYGKDGTGVR--LKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHT 238 Query: 247 IGITKAGCEIFTLSPNN 263 + +T+ GCEI TL P Sbjct: 239 VIVTEDGCEILTLRPEE 255 >gnl|CDD|37949 KOG2738, KOG2738, KOG2738, Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]. Length = 369 Score = 280 bits (717), Expect = 3e-76 Identities = 115/263 (43%), Positives = 156/263 (59%), Gaps = 3/263 (1%) Query: 6 SRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIP 65 S I I PE +E +R AC + LD +++PG TT+EID V +E A P Sbjct: 108 EISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYP 167 Query: 66 ATLNYRGYKKSCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKI 125 + LNY G+ KS CTS+N VICHGIP ++ L +GDIVN+DVT +NG+HGD + + VG + Sbjct: 168 SPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNV 227 Query: 126 KRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFH 185 A+++++VT E L K IA VK + +IG IQ++A YSVV +CGHGIG+ FH Sbjct: 228 DEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFH 287 Query: 186 EKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEH 245 P I H+ + G + G FTIEPM+ +G D WTAVT D SAQ+EH Sbjct: 288 CAPNIPHYAKN--KAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEH 345 Query: 246 TIGITKAGCEIFTL-SPNNLGQP 267 T+ +T+ GCEI T PN+ Sbjct: 346 TLLVTETGCEILTKRLPNSPWFM 368 >gnl|CDD|144226 pfam00557, Peptidase_M24, Metallopeptidase family M24. This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module. Length = 207 Score = 171 bits (435), Expect = 2e-43 Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 26/232 (11%) Query: 21 ENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTS 80 E +R A + A L++ I+PG T E+ + + + + + Sbjct: 1 ELMRKAARIAAAALEAALAAIRPGVTERELAAELEEAFLARGG----ARGPAFPPIVASG 56 Query: 81 INHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESL 140 N + H IPS++ L++GD+V +DV +G+H D +R + VGK + + E+ Sbjct: 57 PNAAVPHYIPSDRVLKDGDLVLIDVGAEYDGYHSDITRTFVVGKPTPEQRELYEAVLEAQ 116 Query: 141 YKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFH-EKPEILHFYDPLYP 199 IAAVK D+ A + Y V GHGIG H E P I+ Sbjct: 117 EAAIAAVKPGVTGGDVDAAAREVLEEGGYGVFPHGLGHGIGLDVHDEGPYIISGGSD--- 173 Query: 200 SVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGITK 251 + GMVFTIEP + GW V + E T+ +T+ Sbjct: 174 --RVLEPGMVFTIEPGI--------YFIPGWGGV--------RIEDTVLVTE 207 >gnl|CDD|29969 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.. Length = 207 Score = 121 bits (303), Expect = 3e-28 Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 30/236 (12%) Query: 20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCT 79 + +R A + + + I+PG T E+ + + PA G Sbjct: 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYPAGPTIVGSGARTA- 59 Query: 80 SINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYES 139 + H P +++L+EGD+V VD+ V +G+H D +R + +G+ + + E+ Sbjct: 60 -----LPHYRPDDRRLQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREA 114 Query: 140 LYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEV-FCGHGIGKSFHEKPEILHFYDPLY 198 +AA++ E++ A + GHGIG HE P + D Sbjct: 115 QEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGHGIGLEIHEPPVLKAGDD--- 171 Query: 199 PSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGITKAGC 254 + GMVF +EP L + G + E T+ +T+ G Sbjct: 172 ---TVLEPGMVFAVEPGLYLPG-----------------GGGVRIEDTVLVTEDGP 207 >gnl|CDD|30356 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 384 Score = 119 bits (298), Expect = 1e-27 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 38/258 (14%) Query: 14 IYTPEELENIRSACNVVARCLDSLTPIIKPGTTT----EEIDDFVLKFGMENNAIPATLN 69 I +P E+ IR A + L++ I+PG T E++ + K G E + Sbjct: 154 IKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGPSFDTI-- 211 Query: 70 YRGYKKSCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAA 129 + N + H PS+++LR+GD+V +D+ V NG+ D +R +P+GK Sbjct: 212 -------VASGENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQ 264 Query: 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEV-FCGHGIGK--SFHE 186 I + E+ IAA++ ++ A ++ Y + + GHG+G HE Sbjct: 265 REIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHE 324 Query: 187 KPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHT 246 P+ L S T + GMVF+IEP + G V E T Sbjct: 325 HPQYLS-----PGSDTTLEPGMVFSIEPGI---------YIPGGGGVR--------IEDT 362 Query: 247 IGITKAGCEIFTLSPNNL 264 + +T+ G E+ T P L Sbjct: 363 VLVTEDGFEVLTRVPKEL 380 >gnl|CDD|29977 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.. Length = 208 Score = 101 bits (253), Expect = 3e-22 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 24/202 (11%) Query: 20 LENIRSACNVVARCLDSLTPIIKPGTTTEE----IDDFVLKFGMENNAIPATLNYRGYKK 75 +E +R A + + + L IKPG T E ++ F+ K G E + Sbjct: 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGPSFDT--------- 51 Query: 76 SCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQV 135 + N + HG+PS++++ EGD+V +D + +G+ D +R VG+ + I ++ Sbjct: 52 IVASGPNSALPHGVPSDRKIEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEI 111 Query: 136 TYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFC---GHGIGKSFHEKPEILH 192 E+ I AVK +++ KA + Y E F GHG+G HE P I Sbjct: 112 VLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYG--EYFIHRTGHGVGLEVHEAPYISP 169 Query: 193 FYDPLYPSVGTFQEGMVFTIEP 214 D +EGMVFTIEP Sbjct: 170 GSD------DVLEEGMVFTIEP 185 >gnl|CDD|29973 cd01088, MetAP2, Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.. Length = 291 Score = 79.1 bits (195), Expect = 1e-15 Identities = 52/199 (26%), Positives = 79/199 (39%), Gaps = 18/199 (9%) Query: 20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCT 79 LE R A + + +IKPG T EI +FV E A PA Sbjct: 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPAF--------PVNL 52 Query: 80 SINHVICHGIPS---NKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVT 136 SIN H P+ + L+EGD+V +D V+G+ DS+ + +L+ Sbjct: 53 SINECAAHYTPNAGDDTVLKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAA 109 Query: 137 YESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGK-SFHEKPEILHFYD 195 E+L I + + +IG+AI+ S + + GH I + H I + Sbjct: 110 KEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLTGHSIERYRLHAGKSIPNVKG 169 Query: 196 PLYPSVGTFQEGMVFTIEP 214 +EG V+ IEP Sbjct: 170 ---GEGTRLEEGDVYAIEP 185 >gnl|CDD|29972 cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.. Length = 243 Score = 62.9 bits (153), Expect = 8e-11 Identities = 47/215 (21%), Positives = 74/215 (34%), Gaps = 30/215 (13%) Query: 20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCT 79 +E +R AC++ A + +PG + E++ A A Y Sbjct: 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARLA------YSYIVAA 54 Query: 80 SINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPV-GKIKRAAERILQVTYE 138 N I H + +++ L++GD+V +D G+ D +R +PV GK + + Sbjct: 55 GSNAAILHYVHNDQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLA 114 Query: 139 SLYKGIAAVKLNANIEDIGKAIQRYAH---------------SERYSVVEVFC----GHG 179 + IAA K + EDI R F GH Sbjct: 115 AQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHY 174 Query: 180 IGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEP 214 +G H+ Y + GMV TIEP Sbjct: 175 LGLDVHDVGG----YLRYLRRARPLEPGMVITIEP 205 >gnl|CDD|37625 KOG2414, KOG2414, KOG2414, Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 488 Score = 55.3 bits (133), Expect = 2e-08 Identities = 60/273 (21%), Positives = 99/273 (36%), Gaps = 58/273 (21%) Query: 14 IYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGY 73 I +P ELE +R ACN+ ++ F + A+ A L Y Sbjct: 228 IKSPAELELMREACNIASQTFSETM--------------FGSRDFHNEAALSALLEYECR 273 Query: 74 KKSC---------CTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGK 124 ++ N H + +N+ L++ ++V VD + G+ D +R +P+ Sbjct: 274 RRGADRLAYPPVVAGGKNANTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISG 333 Query: 125 IKRAAER-----ILQVTYE--SLYKGIAAVKLNA----NIEDIGKAIQ----RYAHSERY 169 A+R +LQV E K L+ + E +G+ ++ R E Sbjct: 334 KFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEM 393 Query: 170 SVVEVFC----GHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKV 225 E C GH +G H+ P + PL P GMV TIEP + + Sbjct: 394 IQAEKLCPHHVGHYLGMDVHDCPTV-SRDIPLQP-------GMVITIEPGVYIPED---- 441 Query: 226 LSDGWTAVTRDRSLSAQYEHTIGITKAGCEIFT 258 R + + E + I + G E+ T Sbjct: 442 ----DDPPEEFRGIGIRIEDDVAIGEDGPEVLT 470 >gnl|CDD|37987 KOG2776, KOG2776, KOG2776, Metallopeptidase [General function prediction only]. Length = 398 Score = 43.1 bits (101), Expect = 8e-05 Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 14/174 (8%) Query: 13 NIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAI---PATLN 69 I + + A +V + L S+ + +PG + EI + +E Sbjct: 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDF 73 Query: 70 YRGYKKSCCTSINHVICHGIP----SNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKI 125 +G S+N+ +CH P ++ L+EGD+V +D+ ++G+ + VG Sbjct: 74 EKGIAFPTSISVNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPA 133 Query: 126 K------RAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVE 173 R A+ I + + + +K + +AI + A S VE Sbjct: 134 PDTPVTGRKADVIA-AAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGCKPVE 186 >gnl|CDD|37986 KOG2775, KOG2775, KOG2775, Metallopeptidase [General function prediction only]. Length = 397 Score = 40.7 bits (95), Expect = 4e-04 Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 25/195 (12%) Query: 4 SSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTT----TEEIDDFVLKFGM 59 ++ E + + +++R A + + IIKPG T E I++ K + Sbjct: 69 TTDEEKRELERTESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLIL 128 Query: 60 ENNAIPATLNYRGYKKSCCTSINHVICHGIPSNKQ---LREGDIVNVDVTYVVNGWHGDS 116 EN + A + G+ C S+NH H P+ L+ D++ +D ++G DS Sbjct: 129 EN-GLNAGI---GFPTGC--SLNHCAAHYTPNAGDKTVLKYDDVMKIDFGTHIDGRIIDS 182 Query: 117 SRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYA-------HSERY 169 + + V + +L E+ GI ++ + DIG+AIQ + + Y Sbjct: 183 A--FTVA-FNPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEINGKTY 239 Query: 170 SV--VEVFCGHGIGK 182 V + GH I + Sbjct: 240 QVKPIRNLNGHSIAQ 254 >gnl|CDD|37948 KOG2737, KOG2737, KOG2737, Putative metallopeptidase [General function prediction only]. Length = 492 Score = 40.7 bits (95), Expect = 5e-04 Identities = 56/294 (19%), Positives = 109/294 (37%), Gaps = 56/294 (19%) Query: 14 IYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGY 73 I + E+E IR A + + + ++PG +++ L + Y Sbjct: 185 IKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGG----CRHLSY 240 Query: 74 KKSCCTSINHVICH----GIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPV-GKIKRA 128 C + N + H G P+++ +++GD+ D+ + + D + +PV GK Sbjct: 241 TCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTAD 300 Query: 129 AERILQVTYESLYKGIAAVKLNANIEDIGK-----AIQRYAHSERYS----------VVE 173 + + ++ + A+K D+ K ++ A + Sbjct: 301 QKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGA 360 Query: 174 VFCGHG----IGKSFHE----KPEILHFYDPLYPSVGT---FQEGMVFTIEP-------M 215 VF HG +G H+ + +P S+ T +EGMV T+EP + Sbjct: 361 VFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFL 420 Query: 216 LNVGGSSAKVLSDGWTAVTRDRSLSAQY--------EHTIGITKAGCEIFTLSP 261 L+ + L+D A +R + ++ E + +TK+G E T P Sbjct: 421 LD------EALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTCVP 468 >gnl|CDD|73244 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.. Length = 228 Score = 37.9 bits (88), Expect = 0.003 Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 24/168 (14%) Query: 24 RSACNVVARCLDSLTPIIKPGTTTEEI----DDFVLK-----FGMENNAIPATLNYRGYK 74 ++A + + L + + PG ++ D +L+ + E +G Sbjct: 5 KTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKK------LEKGIA 58 Query: 75 KSCCTSINHVICHGIP----SNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVG-----KI 125 C S+N+ +CH P + L++GD+V +D+ ++G+ + VG + Sbjct: 59 FPTCISVNNCVCHFSPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPV 118 Query: 126 KRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVE 173 ++ + +L + ++ DI +AIQ+ + VE Sbjct: 119 TGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVE 166 >gnl|CDD|29975 cd01090, Creatinase, Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.. Length = 228 Score = 34.6 bits (79), Expect = 0.028 Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 12/147 (8%) Query: 79 TSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYE 138 + IN H +N++++ GDI++++ ++ G++ R + ++ A +I + Sbjct: 61 SGINTDGAHNPVTNRKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVA 120 Query: 139 SLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYD--- 195 +G+ +K A +DI + F G G SF + H+Y Sbjct: 121 VHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTF---GYGHSFGV---LSHYYGREA 174 Query: 196 --PLYPSVGTFQE-GMVFTIEPMLNVG 219 L + T E GMV ++EPM+ + Sbjct: 175 GLELREDIDTVLEPGMVVSMEPMIMLP 201 >gnl|CDD|29970 cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.. Length = 224 Score = 33.6 bits (77), Expect = 0.055 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 177 GHGIGK--SFHEKPEILHFYDPLYPSVGTFQEGMVFTIEP 214 GHG+G + HE P+ + P + GM+ + EP Sbjct: 161 GHGVGSFLNVHEGPQSISPAPNNVP----LKAGMILSNEP 196 >gnl|CDD|37624 KOG2413, KOG2413, KOG2413, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]. Length = 606 Score = 33.7 bits (77), Expect = 0.057 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Query: 177 GHGIGKSF---HEKPEILHFYDPLYPSVGTFQEGMVFTIEP 214 GHG+G SF HE P + + Y S Q GMVF+IEP Sbjct: 476 GHGVG-SFLNVHEGPIGIGY--RPYSSNFPLQAGMVFSIEP 513 >gnl|CDD|39844 KOG4645, KOG4645, KOG4645, MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]. Length = 1509 Score = 29.6 bits (66), Expect = 0.99 Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 145 AAVKLNANIEDIGKAIQRYAHSERYSVVEVFCG 177 +AVK+ N + + +Q + Y EV G Sbjct: 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITG 1412 >gnl|CDD|48152 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.. Length = 527 Score = 29.0 bits (65), Expect = 1.3 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Query: 11 SINIYTPEELENIRSACNVVARCLDSLTPIIKPGT----TTEEIDDFVLKFGMENNAI 64 + + PE+LE IR + + + + + I+ G TT IDD LK+ +E A+ Sbjct: 243 QVVVTDPEKLEKIRQRESDITK--ERIKKILAAGANVVLTTGGIDDMCLKYFVEAGAM 298 >gnl|CDD|143979 pfam00224, PK, Pyruvate kinase, barrel domain. This domain of the is actually a small beta-barrel domain nested within a larger TIM barrel. The active site is found in a cleft between the two domains. Length = 348 Score = 29.2 bits (66), Expect = 1.3 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 10/94 (10%) Query: 15 YTPEELENIRSACN----VVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNY 70 Y ++N+R A +VA LD+ P I+ G + D LK G + + + Sbjct: 42 YHQSRIDNVREAEEKLGGLVAIALDTKGPEIRTGLFKDGKKDIELKAGDK---FLVSTDP 98 Query: 71 RGYKKSCCTSINHVICHGIPSNKQLREGDIVNVD 104 YK + +V + K + G I+ VD Sbjct: 99 -AYKGAGDKEKIYVDYKNLT--KDVSPGGIILVD 129 >gnl|CDD|39825 KOG4625, KOG4625, KOG4625, Notch signaling protein Neuralized, Nuez domain [Signal transduction mechanisms]. Length = 595 Score = 28.5 bits (63), Expect = 2.4 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Query: 86 CHGIP-SNKQLREGDIVNVDVTYVVNGWHG 114 C I SN+ LR G++ V++ + GW G Sbjct: 128 CDAITFSNRPLRIGELFLVEIEKIERGWSG 157 >gnl|CDD|37180 KOG1969, KOG1969, KOG1969, DNA replication checkpoint protein CHL12/CTF18 [Energy production and conversion, Replication, recombination and repair]. Length = 877 Score = 27.7 bits (61), Expect = 3.5 Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 30/197 (15%) Query: 13 NIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLN--- 69 ++Y P L +R ++A E +++ + M A LN Sbjct: 447 DLYAPA-LRPLRPFAEIIA------FVPPSQSRLVERLNEICHRENM--RADSKALNALC 497 Query: 70 --YRGYKKSCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIK- 126 + +SC ++ + SN R+ I + G +S ++ K Sbjct: 498 ELTQNDIRSCINTLQFL-----ASNVDRRDSSISVKLICAKNVGAKSNSDSLFSWWKEIF 552 Query: 127 --RAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSF 184 R +R + E LY + V+L+ N E + + +YS GIGK Sbjct: 553 QLRKKDRH-RSIDEQLYGLLNQVELHGNSERVLQGCFSIFLRLKYS------DLGIGK-P 604 Query: 185 HEKPEILHFYDPLYPSV 201 + L F+D LY S+ Sbjct: 605 ANASDWLFFHDLLYQSM 621 >gnl|CDD|144974 pfam01579, DUF19, Domain of unknown function DUF19. This presumed domain has no known function. It is found in one or two copies in several Caenorhabditis elegans proteins. It is roughly 130 amino acids long. The domain contains 12 conserved cysteines which suggests that the domain is an extracellular domain and that these cysteines from six intradomain disulphide bridges. The GO annotation for this protein indicates that it has a function in nematode larval development and has a positive regulation of growth rate. Length = 159 Score = 27.4 bits (61), Expect = 4.7 Identities = 5/31 (16%), Positives = 16/31 (51%) Query: 8 ESGSINIYTPEELENIRSACNVVARCLDSLT 38 + +++ +EL+ + +C+ C ++L Sbjct: 22 KMDELDMPNKDELKKFKKSCDSFKSCFETLK 52 >gnl|CDD|30411 COG0062, COG0062, Uncharacterized conserved protein [Function unknown]. Length = 203 Score = 27.2 bits (60), Expect = 4.9 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 1/55 (1%) Query: 125 IKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHG 179 I + E+L + + NA + +AI R R V V CG G Sbjct: 6 SAAEMMAIDDLNAEALGLPLDILMENAG-LAVARAILREYPLGRARRVLVLCGPG 59 >gnl|CDD|146808 pfam04361, DUF494, Protein of unknown function (DUF494). Members of this family of uncharacterized proteins are often named Smg. Length = 155 Score = 26.8 bits (60), Expect = 7.5 Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 6 SRESGSINIYTPEELENIRSAC 27 + SI IYT EE E + + C Sbjct: 62 AASDSSIRIYTDEEQEKLDTEC 83 >gnl|CDD|34759 COG5158, SEC1, Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]. Length = 582 Score = 26.4 bits (58), Expect = 7.7 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 1 MLSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGME 60 LS R SIN +R ++ R LD +TP++ T + D G+ Sbjct: 195 KLSDEIRNELSINFDGVVSKNPLRPILIILDRSLDPITPLLHQWTYQAMLHDL---LGIN 251 Query: 61 NNAIP 65 NN + Sbjct: 252 NNIVT 256 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.317 0.135 0.401 Gapped Lambda K H 0.267 0.0781 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 3,273,519 Number of extensions: 168339 Number of successful extensions: 393 Number of sequences better than 10.0: 1 Number of HSP's gapped: 364 Number of HSP's successfully gapped: 29 Length of query: 273 Length of database: 6,263,737 Length adjustment: 92 Effective length of query: 181 Effective length of database: 4,275,709 Effective search space: 773903329 Effective search space used: 773903329 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 57 (25.6 bits)