HHsearch alignment for GI: 254780900 and conserved domain: COG2844

>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones].

Probab=95.21  E-value=0.29  Score=28.84  Aligned_cols=100  Identities=11%  Similarity=0.176  Sum_probs=59.5

Q ss_pred             CCCHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCH--HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
Q ss_conf             610206889999997417777-655666678310023443885--34465327999924888748999999886699578
Q gi|254780900|r  306 SATASAVLGDICSIAKTNTQK-SVSWALGKESSSFSVIHCDGV--YEEEKEYFIRLTIRNFEGILDKITSQMSDFNISLR  382 (438)
Q Consensus       306 ~~TAsaV~sDli~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~yYLRl~v~DkpGVLa~It~ilak~~ISIe  382 (438)
T Consensus       741 ~dr~~~~~~~l~~~l~s~~~~~~~~~r~~r~~~~f~i~p~v~i~~t~~~~~t~lEv~alDRpGLLa~v~~v~~dl~l~i~  820 (867)
T COG2844         741 EDRRAALRGELIEALLSGKAQPPRRRRIPRKLRHFPIPPRVTILPTASNDKTVLEVRALDRPGLLAALAGVFADLGLSLH  820 (867)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
T ss_conf             25788889999999856887876445667655411478812546565777448999967865379999999874556401


Q ss_pred             EEEECCCCCCCCEEEEEEEEEECCH
Q ss_conf             8882267787761359999210488
Q gi|254780900|r  383 LFSCPHQEENSQEFSVFMITHKVSG  407 (438)
Q Consensus       383 si~Q~~~~~~~~~~~IViiTh~~~e  407 (438)
T Consensus       821 ~AkItT~--GErveD~F~vt~~~~~  843 (867)
T COG2844         821 SAKITTF--GERVEDVFIVTDADGQ  843 (867)
T ss_pred             EEEECCC--CCCCEEEEEEECCCCC
T ss_conf             3253034--6531258999635555