HHsearch alignment for GI: 254780900 and conserved domain: PRK03369

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=91.63  E-value=0.4  Score=27.92  Aligned_cols=85  Identities=20%  Similarity=0.174  Sum_probs=47.3

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC-CCCC-CCHHCCCHHHHHCCCCCCEEEECCC
Q ss_conf             6999982566789999999998999999739965999998268520027-8877-1022078889844889989998648
Q gi|254780900|r    5 LKVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNIDRG-IDCL-RYEWFDDPLIMAGEADIDVFVELIG   82 (438)
Q Consensus         5 ikIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k~~~-~~~~-~~~~~~d~~~li~~~~IDvVVEliG   82 (438)
T Consensus        13 k~V~V~GlG~sG~a~a~~L~~~--------G~~--v-~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vV~S-P   78 (487)
T PRK03369         13 APVLVAGAGVTGRAVLAALTRF--------GAR--P-TVCDDDPDALRPHAERGVATVSSSDAVQQI--ADYALVVTS-P   78 (487)
T ss_pred             CEEEEEEECHHHHHHHHHHHHC--------CCE--E-EEEECCCHHHHHHHHCCCCEECCCCCHHHH--CCCCEEEEC-C
T ss_conf             9899991568389999999978--------697--9-999898257799986599486376226564--677889989-9


Q ss_pred             CCCCCHHHHHHHHHHCCEEEEE
Q ss_conf             8885113578888632702885
Q gi|254780900|r   83 GEDYPAYDAVRIALMRGCHVVT  104 (438)
Q Consensus        83 g~~~pA~~~i~~AL~~GkhVVT  104 (438)
T Consensus        79 GI~-~~~p~l~~a~~~gi~i~~   99 (487)
T PRK03369         79 GFP-PTAPVLAAAAAAGVPIWG   99 (487)
T ss_pred             CCC-CCCHHHHHHHHCCCCEEE
T ss_conf             579-989999999988990765