HHsearch alignment for GI: 254780900 and conserved domain: PRK03381

>PRK03381 PII uridylyl-transferase; Provisional.
Probab=95.95  E-value=0.14  Score=31.18  Aligned_cols=111  Identities=13%  Similarity=0.118  Sum_probs=62.7

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCC-------CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEE--EECCCCCH
Q ss_conf             5897268766610206889999997417777-------65566667831002344388534465327999--92488874
Q gi|254780900|r  296 LTMTGPGAGGSATASAVLGDICSIAKTNTQK-------SVSWALGKESSSFSVIHCDGVYEEEKEYFIRL--TIRNFEGI  366 (438)
Q Consensus       296 ~~~~G~GAG~~~TAsaV~sDli~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~yYLRl--~v~DkpGV  366 (438)
T Consensus       643 ~f~V~~~~g~~~~~~~~~~~l~~al~~~l~~~~~l~~r~~~~~~~~~~~~~~~~prV~~d~~~s~~~TvlEV~a~DRpGL  722 (781)
T PRK03381        643 EFVVSPPFGSPPAAALLRQDLVRALDGDLDVLARLAKREADAAAAVPVTRTPAPPRVLWLDTASPDATVLEVRAADRAGL  722 (781)
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCHHH
T ss_conf             99971677897666899999999982653213454201001355654567999987998888888858999996881779


Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHH
Q ss_conf             899999988669957888822677877613599992104889
Q gi|254780900|r  367 LDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGK  408 (438)
Q Consensus       367 La~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~  408 (438)
T Consensus       723 L~~Ia~~l~~~gl~I~~AkI~--T~Gerv~DvFyVtd~~g~k  762 (781)
T PRK03381        723 LARLTRALEGAGVDVRWAKVN--TLGSDAVDAFYVTEAAGGP  762 (781)
T ss_pred             HHHHHHHHHHCCCEEEEEEEC--CCCCCEEEEEEEECCCCCC
T ss_conf             999999999879879887962--6886089999997799890