HHsearch alignment for GI: 254780900 and conserved domain: PRK03381
>PRK03381 PII uridylyl-transferase; Provisional.
Probab=95.95 E-value=0.14 Score=31.18 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=62.7
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCC-------CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEE--EECCCCCH
Q ss_conf 5897268766610206889999997417777-------65566667831002344388534465327999--92488874
Q gi|254780900|r 296 LTMTGPGAGGSATASAVLGDICSIAKTNTQK-------SVSWALGKESSSFSVIHCDGVYEEEKEYFIRL--TIRNFEGI 366 (438)
Q Consensus 296 ~~~~G~GAG~~~TAsaV~sDli~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~yYLRl--~v~DkpGV 366 (438)
T Consensus 643 ~f~V~~~~g~~~~~~~~~~~l~~al~~~l~~~~~l~~r~~~~~~~~~~~~~~~~prV~~d~~~s~~~TvlEV~a~DRpGL 722 (781)
T PRK03381 643 EFVVSPPFGSPPAAALLRQDLVRALDGDLDVLARLAKREADAAAAVPVTRTPAPPRVLWLDTASPDATVLEVRAADRAGL 722 (781)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCHHH
T ss_conf 99971677897666899999999982653213454201001355654567999987998888888858999996881779
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHH
Q ss_conf 899999988669957888822677877613599992104889
Q gi|254780900|r 367 LDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGK 408 (438)
Q Consensus 367 La~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~ 408 (438)
T Consensus 723 L~~Ia~~l~~~gl~I~~AkI~--T~Gerv~DvFyVtd~~g~k 762 (781)
T PRK03381 723 LARLTRALEGAGVDVRWAKVN--TLGSDAVDAFYVTEAAGGP 762 (781)
T ss_pred HHHHHHHHHHCCCEEEEEEEC--CCCCCEEEEEEEECCCCCC
T ss_conf 999999999879879887962--6886089999997799890