HHsearch alignment for GI: 254780900 and conserved domain: PRK08618

Probab=90.02  E-value=1  Score=25.00  Aligned_cols=167  Identities=18%  Similarity=0.203  Sum_probs=79.6

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC------C-CCCHHCCCHHHHHCCCCCCEE
Q ss_conf             699998256678999999999899999973996599999826852002788------7-710220788898448899899
Q gi|254780900|r    5 LKVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNIDRGID------C-LRYEWFDDPLIMAGEADIDVF   77 (438)
Q Consensus         5 ikIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k~~~~~------~-~~~~~~~d~~~li~~~~IDvV   77 (438)
T Consensus       128 ~~l~iiGaG~QA~~~~~a~~~---------v~~i~~v~v~~r~~~~~~~f~~~~~~~~g~~v~~~~~~~~av~~a--DiV  196 (325)
T PRK08618        128 KTLCLIGTGGQAKGQLEAVLA---------VRDIEKVRVYSRTFEKAYAFAQEIQSKFNTEIYVVESADEAIEEA--DII  196 (325)
T ss_pred             CEEEEECCHHHHHHHHHHHHH---------CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHC--CEE
T ss_conf             569997560799999999986---------089668999947999999999999875099669958999998439--889


Q ss_pred             EECCCCCCCCHHHHHHHHHHCCEEEEEE--CHHHHHHHHHHHHHHHHHCCCEE-EEECCCCCHHHHHHHHHHHH-HCCCC
Q ss_conf             9864888851135788886327028850--41778876899998753139669-96056453013189998764-12862
Q gi|254780900|r   78 VELIGGEDYPAYDAVRIALMRGCHVVTA--NKALIASHGKDLALLAQKNNAIL-NFEAAVAGGIPIIRILKNYV-EYDEI  153 (438)
Q Consensus        78 VEliGg~~~pA~~~i~~AL~~GkhVVTA--NKallA~~g~eL~~lA~~~gv~l-~~easV~ggiPii~~l~~~l-~~~~i  153 (438)
T Consensus       197 ~taT~s~~-Pv---~~~~l~~g~hi~aiGs~~p~~~El~~~~l~~a~--~vvvD~~~~~~~e~Gdl~~~~~~g~~~~~~i  270 (325)
T PRK08618        197 VTVTNAKT-PV---FSEKLKKGVHINAVGSFRPDMQEIPSEAIARAD--KVVVESKEAALEETGDLIVPLKEGLIKKDDI  270 (325)
T ss_pred             EEECCCCC-CC---CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHCC--EEEECCHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             99259998-64---454358871751324689863457899995199--8999878998774232677997188775423


Q ss_pred             E-EEEEEECCCHHH-------HEEHHHCCCCCHHH------HHHHHHHCCC
Q ss_conf             0-343331420000-------00001006877889------9887876176
Q gi|254780900|r  154 N-RVYGIINGTCNY-------ILSHMNNLGLSFQD------CLEEARRQGY  190 (438)
Q Consensus       154 ~-~i~GIlnGT~ny-------IL~~m~~~g~~f~~------al~~Aq~lGy  190 (438)
T Consensus       271 ~~elg~v~~g~~~gr~~~~~itvf~--s~Glai~Dla~A~~vy~~A~~~g~  319 (325)
T PRK08618        271 HGELGQIISGEIAGRESDEEITLFK--SVGLAVVDIVVAKYIYEKAVENGV  319 (325)
T ss_pred             CCCHHHHHCCCCCCCCCCCCCEEEE--CCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             0459998769988888999819998--988699999999999999997399