HHsearch alignment for GI: 254780900 and conserved domain: PRK11092
>PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional.
Probab=97.53 E-value=0.0011 Score=45.94 Aligned_cols=76 Identities=14% Similarity=0.235 Sum_probs=62.1
Q ss_pred HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 446532799992488874899999988669957888822677877613599992104889999999986238300047
Q gi|254780900|r 349 EEEKEYFIRLTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGKLIRDAIECFNGKSDAIRY 426 (438)
Q Consensus 349 ~~~~~yYLRl~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~~i~~ai~~i~~l~~v~~~ 426 (438)
T Consensus 622 ~~~f~~~i~I~~~dr~GlL~dIt~vIs~~~~NI~~v~~~~~--~~~~~~~~i~ieV~d~~hL~~ii~~Lr~i~~V~~V 697 (702)
T PRK11092 622 EQEFITEIKVEMFNHQGALANLTAAINTTGSNIQSLNTEEK--DGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKV 697 (702)
T ss_pred CCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEC--CCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEE
T ss_conf 87136999999967878899999999857998157886874--89889999999989899999999998679992569