HHsearch alignment for GI: 254780900 and conserved domain: PRK12464
>PRK12464 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.
Probab=98.51 E-value=1.8e-06 Score=65.45 Aligned_cols=154 Identities=19% Similarity=0.263 Sum_probs=99.4
Q ss_pred EEC-CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC-CCCC----CCCCCC----------------------CCCH
Q ss_conf 982-56678999999999899999973996599999826-8520----027887----------------------7102
Q gi|254780900|r 9 VAG-LGTVGSALIRSIQKREGRFKDLDQHSFVVSAISAR-DKNI----DRGIDC----------------------LRYE 60 (438)
Q Consensus 9 iiG-~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r-~~~k----~~~~~~----------------------~~~~ 60 (438)
T Consensus 1 ILGSTGSIG~~tL~Vi~~~~~--------~f~V~~Lsa~~n~~~L~~q~~~f~Pk~v~i~d~~~~~~lk~~l~~~~~~~~ 72 (392)
T PRK12464 1 ILGSTGSIGTSTLDVVAAHPE--------RFKVVALTANYNIELLVQQIKRFQPRVVSVADAELADTLRARLSAAGSNTK 72 (392)
T ss_pred CCCCCCHHHHHHHHHHHHCCC--------CEEEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCE
T ss_conf 959575989999999994868--------708999993887999999999949999999488999999998640688837
Q ss_pred HC---CCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 20---788898448899899986488885113578888632702885041778876899998753139669960564530
Q gi|254780900|r 61 WF---DDPLIMAGEADIDVFVELIGGEDYPAYDAVRIALMRGCHVVTANKALIASHGKDLALLAQKNNAILNFEAAVAGG 137 (438)
Q Consensus 61 ~~---~d~~~li~~~~IDvVVEliGg~~~pA~~~i~~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~~easV~gg 137 (438)
T Consensus 73 v~~G~~~l~~~~~~~~~D~vv~Ai~G~a--GL~pt~~ai~~gk~iaLANKEslV~aG~li~~~~k~~~~~Ii-------- 142 (392)
T PRK12464 73 ITYGTDGLIDVATHDGSDLVVSSIVGVA--GLLPTLAALKAGKDIALANKETLVAAGHIVTDLAKQNGCRLL-------- 142 (392)
T ss_pred EEECHHHHHHHHHCCCCCEEEEECCCHH--HHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHCCCEEE--------
T ss_conf 9868899999970778898999445353--469999999749907870515887377999999986298574--------
Q ss_pred HHH---HHHHHHHHHCCC-----CEEEEEEECCCH--HHHEEHHHCCCCCHHHHHH
Q ss_conf 131---899987641286-----203433314200--0000001006877889988
Q gi|254780900|r 138 IPI---IRILKNYVEYDE-----INRVYGIINGTC--NYILSHMNNLGLSFQDCLE 183 (438)
Q Consensus 138 iPi---i~~l~~~l~~~~-----i~~i~GIlnGT~--nyIL~~m~~~g~~f~~al~ 183 (438)
T Consensus 143 -PVDSEHsAIfQ~L~~~~~~~~~V~kIiLTASGGPF~~~~~~~l--~~vT~~~AL~ 195 (392)
T PRK12464 143 -PVDSEHSAIFQCLNGENNKEGGIAKIIVTASGGAFRDKTREEL--ATLTAKDALK 195 (392)
T ss_pred -ECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHCCCHHHH--HCCCHHHHCC
T ss_conf -2360578999997356642266118999657841413789987--0879888704