HHsearch alignment for GI: 254780900 and conserved domain: cd04872
>cd04872 ACT_1ZPV ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein. This CD, ACT_1ZPV, includes those single ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein (pdb structure 1ZPV). Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=96.70 E-value=0.0067 Score=40.36 Aligned_cols=60 Identities=8% Similarity=0.211 Sum_probs=42.6
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEE--EE-ECCHHHHHHHHHHHHC
Q ss_conf 99248887489999998866995788882267787761359999--21-0488999999998623
Q gi|254780900|r 358 LTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMI--TH-KVSGKLIRDAIECFNG 419 (438)
Q Consensus 358 l~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IVii--Th-~~~e~~i~~ai~~i~~ 419 (438)
T Consensus 6 viG~Dr~GIVa~vt~~Lae~~iNI~DisQti~~g--~F~M~m~vd~~~~~~~~~~l~~~L~~~~~ 68 (88)
T cd04872 6 VVGKDRVGIVAGVSTKLAELNVNILDISQTIMDG--YFTMIMIVDISESNLDFAELQEELEELGK 68 (88)
T ss_pred EECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECC--EEEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 9779988789999999998699889535026757--78999999945767999999999999998