HHsearch alignment for GI: 254780900 and conserved domain: cd04874
>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a.a.), putative amino acid binding protein, Af1403, and related domains. This CD includes the N-terminal ACT domain of the yet uncharacterized, small (~133 a.a.), putative amino acid binding protein, Af1403, from Archaeoglobus fulgidus and other related archeal ACT domains. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=97.42 E-value=0.00072 Score=47.18 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=54.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 799992488874899999988669957888822677877613599992104889999999986238300047
Q gi|254780900|r 355 FIRLTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGKLIRDAIECFNGKSDAIRY 426 (438)
Q Consensus 355 YLRl~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~~i~~ai~~i~~l~~v~~~ 426 (438)
T Consensus 2 al~I~a~nk~GVL~~itgvIa~hg~NItytqqfi~~--~g~~~iY~ElE~v--~d~e~Li~~L~~~~~V~eV 69 (72)
T cd04874 2 ALSIIAEDKPGVLRDLTGVIAEHGGNITYTQQFIER--EGKARIYMELEGV--GDIEELVEELRSLPIVREV 69 (72)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEC--CCEEEEEEEEECC--CCHHHHHHHHHCCCCEEEE
T ss_conf 379995687746999887998648986999999807--9828999999679--9989999998779955999