HHsearch alignment for GI: 254780900 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=93.58 E-value=0.43 Score=27.65 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=43.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCC------CCCCHHCCCHHHHHCCCCCCEEE
Q ss_conf 699998256678999999999899999973996599999826852002788------77102207888984488998999
Q gi|254780900|r 5 LKVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNIDRGID------CLRYEWFDDPLIMAGEADIDVFV 78 (438)
Q Consensus 5 ikIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k~~~~~------~~~~~~~~d~~~li~~~~IDvVV 78 (438)
T Consensus 130 ~~l~iiGaG~QA~~~l~al~~v---------~~i~~v~v~~r~~~~~~~f~~~~~~~~~~v~~~~~~~~av~~--ADIIv 198 (312)
T pfam02423 130 STLAIIGAGAQAEFQAEALSAV---------LPIEEIRIYDRDPEAAEKFARNLQGKGFEIVACTSAEEAVEG--ADIVV 198 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHH---------CCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHC--CCEEE
T ss_conf 5799964625389999999961---------997689999689899999999998349965994899999714--99899
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEEE
Q ss_conf 86488885113578888632702885
Q gi|254780900|r 79 ELIGGEDYPAYDAVRIALMRGCHVVT 104 (438)
Q Consensus 79 EliGg~~~pA~~~i~~AL~~GkhVVT 104 (438)
T Consensus 199 taT~s~~~P~~~--~~~l~~G~hv~~ 222 (312)
T pfam02423 199 TVTPDKEFPILK--AEWVKPGVHINA 222 (312)
T ss_pred EEECCCCCCCCC--HHHCCCCCEEEE
T ss_conf 973599775007--788389868997