HHsearch alignment for GI: 254780901 and conserved domain: PRK13936

Probab=90.21  E-value=1.7  Score=23.91  Aligned_cols=104  Identities=21%  Similarity=0.337  Sum_probs=60.5

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH--HHHHHHCC-----CCEEEEEC-----CCCCCCCCCCHHHHH
Q ss_conf             4879999999999977997999940788615289999--99999769-----94799807-----874336688978988
Q gi|254780901|r   76 TDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALM--MRFLSHCS-----VNANMYIP-----DRIVDGYGPNPSLME  143 (600)
Q Consensus        76 ~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail--~~~L~~~g-----~~v~~~IP-----~R~~eGYGl~~~~i~  143 (600)
T Consensus        27 ~~i~~aa~~i~~~~~~g~ki~~~G---NGgSaa~A~h~a~el~~~~~~~r~~lpai~L~~d~~~lTai~ND~g~~~vf~r  103 (197)
T PRK13936         27 PPIAQAVELMVQALLNEGKILACG---NGGSAADAQHFSSELLNRFERERPSLPAIALTTDSSTLTAIANDYSYNEVFSK  103 (197)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHH
T ss_conf             999999999999998799899996---87899999999999866541278887557643674011010278789999999


Q ss_pred             HH---HHCCCCEEEEEC-CCCC--CHHHHHHHHHCCCCEEEECCCC
Q ss_conf             74---202686899964-8876--2345555541798279961544
Q gi|254780901|r  144 KF---INEGAQLIITVD-CGST--SYDALQYATNQGIDVIVIDHHQ  183 (600)
Q Consensus       144 ~~---~~~g~~LiItvD-~Gi~--~~e~i~~a~~~GidvIVtDHH~  183 (600)
T Consensus       104 Ql~a~~~~g-Dili~iS~SGnS~Nii~A~~~A~~~g~~~i~ltG~d  148 (197)
T PRK13936        104 QVRALGQPG-DVLLAISTSGNSANVIQAIQAAHEREMHVVALTGRD  148 (197)
T ss_pred             HHHHHCCCC-CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             999838999-989999699999899999999998599599998168