HHsearch alignment for GI: 254780901 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=94.17 E-value=0.58 Score=27.48 Aligned_cols=103 Identities=23% Similarity=0.313 Sum_probs=70.1
Q ss_pred CCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CH
Q ss_conf 19667771899556148799999999999779979999407886152899999999976994799807874336688-97
Q gi|254780901|r 61 LNPSIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGP-NP 139 (600)
Q Consensus 61 L~p~l~~l~~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl-~~ 139 (600)
T Consensus 98 Vi~D~~~LlPD~~e---Tl~Aae~L---v~~GF~VlpY~~~D-------~v~akrLe~~Gc~avMPlgsPIGSg~Gl~n~ 164 (248)
T cd04728 98 VIGDDKTLLPDPIE---TLKAAEIL---VKEGFTVLPYCTDD-------PVLAKRLEDAGCAAVMPLGSPIGSGQGLLNP 164 (248)
T ss_pred EECCCCCCCCCHHH---HHHHHHHH---HHCCCEEEEECCCC-------HHHHHHHHHCCCEEEEECCCCCCCCCCCCCH
T ss_conf 81797677988689---99999999---98899897867889-------9999999974953452045643479887999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 89887420268689996488762345555541798279
Q gi|254780901|r 140 SLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 140 ~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
T Consensus 165 ~~l~~i~e~-~~vPvIVDAGiG~pS~Aa~aMElG~daV 201 (248)
T cd04728 165 YNLRIIIER-ADVPVIVDAGIGTPSDAAQAMELGADAV 201 (248)
T ss_pred HHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHCCCCEE
T ss_conf 999999984-7998898479997567899987265533