HHsearch alignment for GI: 254780901 and conserved domain: pfam01368
>pfam01368 DHH DHH family. It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Probab=99.74 E-value=9.9e-17 Score=150.81 Aligned_cols=150 Identities=38% Similarity=0.563 Sum_probs=121.5
Q ss_pred HHHCCCCEEEEECC--CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC--CCCCHHHHHHHHHC--CCCEEEEECCCCC
Q ss_conf 99779979999407--886152899999999976994799807874336--68897898874202--6868999648876
Q gi|254780901|r 88 AIYNSEKIMIFGDY--DVDGAASVALMMRFLSHCSVNANMYIPDRIVDG--YGPNPSLMEKFINE--GAQLIITVDCGST 161 (600)
Q Consensus 88 ai~~~ekI~I~gDy--D~DGitstail~~~L~~~g~~v~~~IP~R~~eG--YGl~~~~i~~~~~~--g~~LiItvD~Gi~ 161 (600)
T Consensus 1 ai~~~~~i~i~~H~~pD~DaigS~~~l~~~L~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvI~vD~~~~ 80 (156)
T pfam01368 1 AIKEGEKILIVGHYNPDADGIGSAAALALALKRLGAEKDYVVPPREIEGKFYGLSDEIVEDIAEEKGKADLLITVDTGST 80 (156)
T ss_pred CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCH
T ss_conf 97679889997479988748899999999999839964685589888723306778899999853789898999769953
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 23455555417982799615447655567256523788886433443047889999999999970214887640779999
Q gi|254780901|r 162 SYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVPLNFDLLSL 241 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~~~~~~~l~~~ 241 (600)
T Consensus 81 ~r~~~~~~~~~~~~~ivIDHH~~~~~~~--~~~in~~~~~---~~v~~~asst~elv~~~~~~-~~~----~~~---~~~ 147 (156)
T pfam01368 81 AREEIELAKLLGIDVIVIDHHEPPENDL--PPIINPADLG---PYIDLSASSTAELVAEALLG-LEL----KLN---RNL 147 (156)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCC--CCCCCCCCCC---CCCCCCCCCHHHHHHHHHHH-CCC----CCC---HHH
T ss_conf 5554699998699789983687877776--5223734356---66587706599999999998-489----766---999
Q ss_pred HHHHHHHHH
Q ss_conf 999877542
Q gi|254780901|r 242 LDLVALATV 250 (600)
Q Consensus 242 ldlvaiGTv 250 (600)
T Consensus 148 A~~l~~Giv 156 (156)
T pfam01368 148 ADLLALGIV 156 (156)
T ss_pred HHHHHHCCC
T ss_conf 999995169