HHsearch alignment of GI: 254780901 and MMDB domain: 2vk2_A_1-108_251-276
>2vk2_A (A:1-108,A:251-276) YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=91.25 E-value=0.93 Score=25.37 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=71.9
Q ss_pred CEEEEECCCCCHHHHHHHH---HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC-CCHHHHHHH
Q ss_conf 7999940788615289999---999997699479980787433668897898874202686899964887-623455555
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALM---MRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGS-TSYDALQYA 169 (600)
Q Consensus 94 kI~I~gDyD~DGitstail---~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi-~~~e~i~~a 169 (600)
+|.+.-. |.+.--.+.++ .+.++..|.++..+-.+.-.+ .....++.+.+.+++-||.+-... ...+.++.+
T Consensus 4 ~Igvi~~-~~~~~f~~~i~~gi~~~a~~~G~~l~i~~~~~d~~---~e~~~i~~l~~~~vDGIIi~~~~~~~~~~~i~~~ 79 (134)
T 2vk2_A 4 TVGFSQV-GSESGWRAAETNVAKSEAEKRGITLKIADGQQKQE---NQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEA 79 (134)
T ss_dssp EEEEEEC-CCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHH---HHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHH
T ss_pred EEEEEEC-CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 9999968-99899999999999999998599899995899999---9999999999759999998325654116889999
Q ss_pred HHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 4179827996154476555672565237888864334430478899999999999702148876
Q gi|254780901|r 170 TNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVP 233 (600)
Q Consensus 170 ~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~~~ 233 (600)
++.|+.||+.|.+.+.... .++++.. ..+. +|-||--+ +++.+++..|
T Consensus 80 ~~~~iPVV~id~~~~~~~~---~~vv~~d-------~~~~--~~~~~~~~----~~~~~~~~~~ 127 (134)
T 2vk2_A 80 KDAEIPVFLLDRSIDVKDK---SLYMTTV-------TADM--AGPAFDAL----EKYKKDGTMP 127 (134)
T ss_dssp HHTTCCEEEESSCCCCSCG---GGSSEEE-------ECCC--HHHHHHHH----HHHHHHCCCC
T ss_pred HHCCCCEEEECCCCCCCCC---CCCCEEE-------ECCH--HHHHHHHH----HHHHHCCCCC
T ss_conf 8619975774454455556---6652058-------4269--99999999----9998579999