HHsearch alignment of GI: 254780901 and MMDB domain: 2zxr_A_49-242
>2zxr_A (A:49-242) Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=99.96 E-value=2.9e-28 Score=240.47 Aligned_cols=192 Identities=32% Similarity=0.477 Sum_probs=174.0
Q ss_pred CHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 95561487999999999997799799994078861528999999999769947998078743366889789887420268
Q gi|254780901|r 71 DPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGA 150 (600)
Q Consensus 71 dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~ 150 (600)
+|++|++|+++++++.++++++++|+|++|+|+||.+++++|..+|...|..+.+++|++..++||++...+++..++ +
T Consensus 3 ~~~~~~~m~~~~~~l~~~l~~~~~i~I~~H~d~Dgda~~s~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 81 (194)
T 2zxr_A 3 ALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEA-S 81 (194)
T ss_dssp CCCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEECCC---------------------C
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHC-C
T ss_conf 338865899999999999976997999960585077999999999998899769987786656888799999998608-9
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 68999648876234555554179827996154476555672565237888864334430478899999999999702148
Q gi|254780901|r 151 QLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDN 230 (600)
Q Consensus 151 ~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~ 230 (600)
+++|+||||+.+..+...+++.|.++||+|||.+++..+ ..+++||++.+ ++++.+|++|++|.+++.+.+.++...
T Consensus 82 d~vi~vD~~~~~~~~~~~~~~~~~~viiIDHH~~~~~~~-~~~~vn~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~ 158 (194)
T 2zxr_A 82 DLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPP-PGLVVHPALTP--DLKEKPTGAGVAFLLLWALHERLGLPP 158 (194)
T ss_dssp CEEEESCCC--------------CEEEEECCCC---------CEECGGGST--TCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC-CCEEECCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 989997488334899998986799899949799987787-54576456577--653345221799999999874344433
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8764077999999987754201111444118999987887751
Q gi|254780901|r 231 KVPLNFDLLSLLDLVALATVCDVVPLIGLNRAYVVKGLMVARR 273 (600)
Q Consensus 231 ~~~~~~~l~~~ldlvaiGTvaD~vpL~~eNR~lvk~GL~~l~~ 273 (600)
. .++.+++++|.++|.+++.++||.++++|++.|+.
T Consensus 159 ~-------~~~a~~l~~Gi~~Dt~~f~~~~~~~~~~a~~~L~a 194 (194)
T 2zxr_A 159 P-------LEYADLAAVGTIADVAPLWGWNRALVKEGLARIPA 194 (194)
T ss_dssp C-------GGGHHHHHHHHHHTTCCCSHHHHHHHHHHHHHGGG
T ss_pred H-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9-------99998977765324435407789998756665303