HHsearch results for GI: 254780901 and protein with PDBid: 1nri_A
>1nri_A Hypothetical protein HI0754; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=95.40 E-value=0.18 Score=29.73 Aligned_cols=182 Identities=14% Similarity=0.134 Sum_probs=101.3
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHHHCCCC---EEEEECCC----------CCCCCCC
Q ss_conf 56148799999999999779979999407886--152899999999976994---79980787----------4336688
Q gi|254780901|r 73 LILTDCDKAARRIVQAIYNSEKIMIFGDYDVD--GAASVALMMRFLSHCSVN---ANMYIPDR----------IVDGYGP 137 (600)
Q Consensus 73 ~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~D--Gitstail~~~L~~~g~~---v~~~IP~R----------~~eGYGl 137 (600)
..+++++++++.+.++++++-+|.++| +- |..+.-.-+++...++.+ +.+.+..= ..+.|..
T Consensus 52 ~~l~~I~~av~~i~~~l~~gGri~~~G---~GtSG~la~~~a~e~~~tf~~~~~~~~~~iaggd~al~~~~e~~ed~~~~ 128 (306)
T 1nri_A 52 SCLPQISLAVEQIVQAFQQGGRLIYIG---AGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNTKA 128 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEE---SHHHHHHHHHHHHHHHHHHCCCTTSEEEEETTCTHHHHSCCTTGGGCTTH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCHHHHHHHHHCCCCHHH
T ss_conf 989999999999999997498599976---87239999999998646568982213000267938876566512464889
Q ss_pred CHHHHHHHHHCCCCEEEEECC-CCC--CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 978988742026868999648-876--23455555417982799615447655567256523788886433443047889
Q gi|254780901|r 138 NPSLMEKFINEGAQLIITVDC-GST--SYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGV 214 (600)
Q Consensus 138 ~~~~i~~~~~~g~~LiItvD~-Gi~--~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGv 214 (600)
-..-+....-..-+++|.+-+ |.+ -.+++++|+++|+.+|.+-.-....-...++..|+|.....-.+...=..+|.
T Consensus 129 ~~~~~~~~~i~~~DvvI~IS~SG~tp~vi~al~~Ak~~G~~ti~it~~~~s~l~~~ad~~I~~~~g~E~~~gs~r~~a~t 208 (306)
T 1nri_A 129 VLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPEILTGSSRLKSGT 208 (306)
T ss_dssp HHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSCSSTTCTTTHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCEEEECCCCCCCCCCCCCCHHHH
T ss_conf 99999995799888489996899964579999999972686699976887510021776785488976456765748999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999999702148876407799999998775420--1111444118999987887751
Q gi|254780901|r 215 VFLVLVLIYRILRQDNKVPLNFDLLSLLDLVALATVC--DVVPLIGLNRAYVVKGLMVARR 273 (600)
Q Consensus 215 af~l~~al~~~l~~~~~~~~~~~l~~~ldlvaiGTva--D~vpL~~eNR~lvk~GL~~l~~ 273 (600)
|-|++.-.. .-.-++-+|.|- +|+.+.--|..+.+.|.+.+.+
T Consensus 209 a~k~iLn~i----------------st~~~~~~gkv~~n~mvd~~~~n~kl~~r~~ri~~~ 253 (306)
T 1nri_A 209 AQKMVLNML----------------TTASMILLGKCYENLMVDVQASNEKLKARAVRIVMQ 253 (306)
T ss_dssp HHHHHHHHH----------------HHHHHHHTTSCBTTBCTTCCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----------------HHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHH
T ss_conf 999999999----------------999999859865560100202763799999999998