HHsearch results for GI: 254780901 and protein with PDBid: 2zvf_A
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=94.00 E-value=0.38 Score=27.24 Aligned_cols=138 Identities=14% Similarity=0.119 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEEECCC
Q ss_conf 89999999999899999999999999999998752112434750262057858122222278998842010799886379
Q gi|254780901|r 327 QELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEGDRWHPGIVGLLAARLKEKFGRPSFAISFEED 406 (600)
Q Consensus 327 ~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~ivv~~~~wh~GViGIVAsrL~e~y~kP~iv~s~~~d 406 (600)
+...++.+++.++.++.+.++.++...-.+.+..........+++ +...+...-.+--++.++.++. .-+++++..++
T Consensus 32 ~~i~~l~~e~k~l~k~~~~l~~~~~~~~~~~l~~~~~~i~~~~vv-~~~~~~d~~~lr~l~~~l~~~~-~~~vl~~~~~~ 109 (171)
T 2zvf_A 32 KTVERFFEEWKDQRKEIERLKSVIADLWADILMERAEEFDSMKVV-AEVVDADMQALQKLAERLAEKG-AVGCLMAKGEG 109 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEESSSCEEE-EEECSCCHHHHHHHHHHHHHTT-EEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEE-EEECCCCHHHHHHHHHHHHCCC-CEEEEEECCCC
T ss_conf 999999999999999999999999999877776461677899888-6105899899999999984447-73897742688
Q ss_pred CEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC-CCCCEEECCCCHHHHHHHHHHHHHHHC
Q ss_conf 83799986489861888888530335301156532-223146422215889999999998622
Q gi|254780901|r 407 GKGIGSGRSIEGFDIGKMVSFAVEEGILVKGGGHA-MAAGLTVERVNFGRLCDFFQKFAHNIV 468 (600)
Q Consensus 407 g~~kGS~RSi~g~~l~~~l~~~~~~~ll~~~GGH~-~AaG~ti~~~~l~~f~~~l~~~~~~~~ 468 (600)
....-++.| .++|..+++...+.. +-.++||-+ +|=|=.=..++++++.+.+.+++.++.
T Consensus 110 k~~v~~~~~-~~i~A~~ivk~~~~~-~~GkGGG~~~~AQggg~~~~~~~~~l~~~~~~l~~~~ 170 (171)
T 2zvf_A 110 KVFVVTFSG-QKYDARELLREIGRV-AKGSGGGRKDVAQGAVQQLLDREEMLDVIFRFLSEHE 170 (171)
T ss_dssp SEEEEEEES-SSSCHHHHHHHHHHH-HTEECCBCSSEEEEEESSCCCHHHHHHHHHHHHHHHT
T ss_pred CEEEEECCC-CCCCHHHHHHHHHHH-CCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 525775066-777899999999987-3998789668703479986789999999999998706