HHsearch results for GI: 254780901 and protein with PDBid: 3dev_A

>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.10A {Staphylococcus haemolyticus JCSC1435}
Probab=99.89  E-value=2.5e-21  Score=185.05  Aligned_cols=301  Identities=15%  Similarity=0.163  Sum_probs=164.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECC--CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH--HHHHHHHCCCCEE
Q ss_conf             799999999999779979999407--886152899999999976994799807874336688978--9887420268689
Q gi|254780901|r   78 CDKAARRIVQAIYNSEKIMIFGDY--DVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPS--LMEKFINEGAQLI  153 (600)
Q Consensus        78 m~~A~~ri~~ai~~~ekI~I~gDy--D~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~--~i~~~~~~g~~Li  153 (600)
                      |.+..++|.+.|++.++|+|+|+.  |.||+.|+..|..+|+.+|.++.+++|.++.++|+.-..  .+.+... ..+++
T Consensus         1 m~~~~~~i~~~i~~~~~i~I~~H~~pD~D~igSa~al~~~l~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~~v   79 (320)
T 3dev_A            1 MVEIFNEIMQRVKEAETIIIHRHVRPDPDAYGSQLGLKLYLERKFPEKNIYATGEAEPSLSFIGDLDEIDDSVY-SDALV   79 (320)
T ss_dssp             CCCHHHHHHHHHHTCSEEEEECBSSCCHHHHHHHHHHHHHHHHHCTTSEEEECCCCCGGGTTTCCCCCCCSSTT-TTCEE
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHCCCCC-CCCEE
T ss_conf             96899999999965995999968998578999999999999960998599988999757775478153020025-76469


Q ss_pred             EEECCCCCCHHHHHH-HHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             996488762345555-5417982799615447655567256523788886433443047889999999999970214887
Q gi|254780901|r  154 ITVDCGSTSYDALQY-ATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKV  232 (600)
Q Consensus       154 ItvD~Gi~~~e~i~~-a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~~  232 (600)
                      |+|||+..+  .+.. ....+..+||+|||..++. +....+|+|+.         -|.+.+.|.++..    ++....+
T Consensus        80 IivD~~~~~--~i~~~~~~~~~~vivIDHH~s~~~-~~~~~~id~~~---------~st~~lv~~~~~~----~~~~~~i  143 (320)
T 3dev_A           80 IVCDTANAP--RIDDQRYLNGQSLIKIDHHPATDQ-YGDVNFVNTEA---------SSTSEIIFDFISH----FNDLSII  143 (320)
T ss_dssp             EEESCSSGG--GBSSGGGGSSSCEEEEECSCSSCC-CSSEEEECTTS---------SCHHHHHHHHHHT----TTCTTTC
T ss_pred             EEECCCCCC--CCCCHHHHCCCCEEEEEECCCCCC-CCCEEEEECCC---------CHHHHHHHHHHHH----HCCCCCC
T ss_conf             993589745--465244523784599985258776-76357872450---------0399999999997----4035799


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHC
Q ss_conf             64077999999987754201111444118999987887751688743578987088864242345666774306233312
Q gi|254780901|r  233 PLNFDLLSLLDLVALATVCDVVPLIGLNRAYVVKGLMVARRQGNPGLKALIERVNISSPITAENLGYMIGPSINAGGRIG  312 (600)
Q Consensus       233 ~~~~~l~~~ldlvaiGTvaD~vpL~~eNR~lvk~GL~~l~~~~~~gl~~L~~~~~~~~~i~~~di~f~iaPrINAaGRl~  312 (600)
                        ......+   ...|.+.|.--+..                               ...++.  .|.++..|.+.|-  
T Consensus       144 --~~~~a~~---l~~gi~~Dt~~~~~-------------------------------~~~~~~--~~~~~~~L~~~g~--  183 (320)
T 3dev_A          144 --DEHVARV---LYLGIVGDTGRFLF-------------------------------SNTSPH--TMEVASQLLAYPF--  183 (320)
T ss_dssp             --CHHHHHH---HHHHHHHHTTTTTS-------------------------------TTCCHH--HHHHHHHHHHSSS--
T ss_pred             --CHHHHHH---HHHHHHHHHCCEEC-------------------------------CCCCHH--HHHHHHHHHHCCC--
T ss_conf             --9999999---99999666163324-------------------------------899876--9999999987399--


Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE--EE-----CCCCCHHHHHH
Q ss_conf             122221002034258999999999989999999999999999999875211243475026--20-----57858122222
Q gi|254780901|r  313 ESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIV--VE-----GDRWHPGIVGL  385 (600)
Q Consensus       313 ~a~~av~lL~~~d~~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~iv--v~-----~~~wh~GViGI  385 (600)
                      +....               ...+.+...++..+    ...+...+    .......+..  +.     .-+..++-+.-
T Consensus       184 ~~~~~---------------~~~l~~~~~~~~~~----~~~~l~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  240 (320)
T 3dev_A          184 NHNAE---------------LNKMSEKDPKLMPF----QGYVLQNF----ELSDSHEYCQIKITNDVLKQFDIQPNEASQ  240 (320)
T ss_dssp             CHHHH---------------HHHHHCBCGGGHHH----HHHHHHSC----CBCTTSSEEEEEECHHHHHHTTCCHHHHTT
T ss_pred             CHHHH---------------HHHHHHHHHHHHHH----HHHHHHCC----CEECCCCEEEEECCHHHHHHCCCCCHHHHH
T ss_conf             55999---------------99998757899999----99996100----032588689996258889872897236789


Q ss_pred             HHHHHHHHHHCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEC-CCCHHHHHHHHHHHH
Q ss_conf             2789988420107998863798379998648986188888853033530115653222314642-221588999999999
Q gi|254780901|r  386 LAARLKEKFGRPSFAISFEEDGKGIGSGRSIEGFDIGKMVSFAVEEGILVKGGGHAMAAGLTVE-RVNFGRLCDFFQKFA  464 (600)
Q Consensus       386 VAsrL~e~y~kP~iv~s~~~dg~~kGS~RSi~g~~l~~~l~~~~~~~ll~~~GGH~~AaG~ti~-~~~l~~f~~~l~~~~  464 (600)
                      +++.+...-+.++.++-...++..++|+|| .|+|+.++...      | .+|||++|||++|+ .+.++++.+.+.+..
T Consensus       241 iv~~l~~i~g~~v~~~~~~~~~~v~~S~RS-~~~dv~~ia~~------~-gGGGH~~AAG~~i~~~~~~~~~~~~l~~~l  312 (320)
T 3dev_A          241 FVNTVADISGLKIWMFGVDEGDQIRCRIRS-KGITINDVANQ------F-GGGGHPNASGVSVYSWDEFEELAQALRQKL  312 (320)
T ss_dssp             CGGGSTTBTTCCEEEEEEECSSSEEEEEEE-SSSCCHHHHHH------T-TCEEETTEEEEEESSHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCEEEEEEEEEECCEEEEEEEC-CCCCHHHHHHH------H-CCCCCHHHCEEEECCCCHHHHHHHHHHHHH
T ss_conf             998855847659999999989999999978-99799999988------1-996556624888488433999999999998


Q ss_pred             HH
Q ss_conf             86
Q gi|254780901|r  465 HN  466 (600)
Q Consensus       465 ~~  466 (600)
                      .+
T Consensus       313 ~e  314 (320)
T 3dev_A          313 LE  314 (320)
T ss_dssp             TS
T ss_pred             HH
T ss_conf             76