RPSBLAST alignment of GI: 254780901 and protein with PDBid: 2zxr

>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A Length = 666

 Score =  423 bits (1088), Expect = e-119
 Identities = 151/578 (26%), Positives = 252/578 (43%), Gaps = 51/578 (8%)

Query: 16  FRWVSLLGQEGINRALAITQKHAIPDIVARVLVNRNVSIDYAKDFLNPSIRLLMPDPLIL 75
            RW  +L    + +   +     +    A    +R       K+ L+P + LL      L
Sbjct: 5   VRWR-VLSLPPLAQWREVMAALEVGPEAALAYWHRGFR---RKEDLDPPLALLP-----L 55

Query: 76  TDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGY 135
               +AA  + +A+   ++I + GDYD DG    A+++R L+    + + +IP R+ +GY
Sbjct: 56  KGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGY 115

Query: 136 GPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALV 195
           G     + + + E + L +TVDCG T++  L+     G++VIV DHH    +  P   +V
Sbjct: 116 GVLMERVPEHL-EASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTP-GKTPPPGLVV 173

Query: 196 NPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVPLNFDLLSLLDLVALATVCDVVP 255
           +P    DL  +     AGV F        +L   ++       L   DL A+ T+ DV P
Sbjct: 174 HPALTPDL--KEKPTGAGVAF-------LLLWALHERLGLPPPLEYADLAAVGTIADVAP 224

Query: 256 LIGLNRAYVVKGLMVARRQGNPGLKALIERVNISSPITAENLGYMIGPSINAGGRIGESN 315
           L G NRA V +GL         GL+ L E V       A  + + I P INA  R+GE+ 
Sbjct: 225 LWGWNRALVKEGLARIPASSWVGLRLLAEAVGY--TGKAVEVAFRIAPRINAASRLGEAE 282

Query: 316 LGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEG 375
              RLL++DD+ E + L  +L  LN  R+ +E AML +             +A  IV+  
Sbjct: 283 KALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRKL------LPQADPEAKAIVLLD 336

Query: 376 DRWHPGIVGLLAARLKEKFGRPSFAISFEEDGKGIGSGRSIEGFDIGKMVSFAVEEGILV 435
              HPG++G++A+R+ E   RP F ++     +G G+ RS+      + +  A +  +L+
Sbjct: 337 PEGHPGVMGIVASRILEATLRPVFLVA-----QGKGTVRSLAPISAVEALRSAED--LLL 389

Query: 436 KGGGHAMAAGLTVERVNFGRLCDFFQKFAHNIVPALITTPVFKIDGVLNASAVNIALIDM 495
           + GGH  AAG  ++   F       + +A      +       +  +L    +   +   
Sbjct: 390 RYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREV---ALLDLLPEPGLLPQVFRE 446

Query: 496 LESAGPYGAGNPNPVFAFPNHKLQSIRVVNLAHLQMTFESQDSETLQAIAFRVYGTPLGE 555
           L    PYG GNP P+F       ++ R+    HL    +      ++ +A++     L  
Sbjct: 447 LALLEPYGEGNPEPLFLLFGAPEEARRLGEGRHLAFRLKG-----VRVLAWKQGDLAL-- 499

Query: 556 FLMQSRGKRMHVTGHLCVNYWRGSKRCQLRVLDASPVE 593
                    + V G L  N W G    +++ +D    E
Sbjct: 500 ------PPEVEVAGLLSENAWNGHLAYEVQAVDLRKPE 531