RPSBLAST alignment of GI: 254780901 and SCOP domain: d1ir6a_

Alignment

 Score =  237 bits (606), Expect = 1e-63
 Identities = 120/410 (29%), Positives = 192/410 (46%), Gaps = 28/410 (6%)

Query: 71  DPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDR 130
             L L    +AA  + +A+   ++I + GDYD DG    A+++R L+    + + +IP R
Sbjct: 3   ALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHR 62

Query: 131 IVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIP 190
           + +GYG     + + + E + L +TVDCG T++  L+     G++VIV DHH       P
Sbjct: 63  LEEGYGVLMERVPEHL-EASDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPP 121

Query: 191 AYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVPLNFDLLSLLDLVALATV 250
              +      D    +     AGV FL+L  ++  L            L   DL A+ T+
Sbjct: 122 GLVVHPALTPDL---KEKPTGAGVAFLLLWALHERLGL-------PPPLEYADLAAVGTI 171

Query: 251 CDVVPLIGLNRAYVVKGLMVARRQGNPGLKALIERVNISSPITAENLGYMIGPSINAGGR 310
            DV PL G NRA V +GL         GL+ L E V  +       + + I P INA  R
Sbjct: 172 ADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAV--EVAFRIAPRINAASR 229

Query: 311 IGESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASV 370
           +GE+    RLL++DD+ E + L  +L  LN  R+ +E AML +             +A  
Sbjct: 230 LGEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRK------LLPQADPEAKA 283

Query: 371 IVVEGDRWHPGIVGLLAARLKEKFGRPSFAISFEEDGKGIGSGRSIEGFDIGKMVSFAVE 430
           IV+     HPG++G++A+R+ E   RP F ++     +G G+ RS+      + +  A  
Sbjct: 284 IVLLDPEGHPGVMGIVASRILEATLRPVFLVA-----QGKGTVRSLAPISAVEALRSA-- 336

Query: 431 EGILVKGGGHAMAAGLTVERVNFGRLCDFFQKFAHNIVPALITTPVFKID 480
           E +L++ GGH  AAG  ++   F       + +A      +    V  +D
Sbjct: 337 EDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVR--EVALLD 384

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DHH phosphoesterases
superfamily: DHH phosphoesterases
family: Exonuclease RecJ
domain: Exonuclease RecJ
species: Thermus thermophilus [TaxId: 274]