HHsearch alignment for GI: 254780902 and conserved domain: COG0473
>COG0473 LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=783.41 Aligned_cols=338 Identities=20% Similarity=0.199 Sum_probs=304.0
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCCC---CCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCC
Q ss_conf 13867997598630899999999984179---984489982748998652862778999999865938872644898544
Q gi|254780902|r 6 VTKPVVSLDGDEMTRIIWQLIQENLIHPY---LDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQAR 82 (412)
Q Consensus 6 m~~~Iv~l~GDgiG~Ei~~~~l~vl~~~~---~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~~ 82 (412)
T Consensus 2 ~~~~IavipGDGIGpEv~~~a~kVl~a~~~~~~~~e~~~~~~G~~~~~~~G~~lpeetl~~~~~~DaiL~Gavg~P~~~~ 81 (348)
T COG0473 2 KTYTIAVIPGDGIGPEVMAAALKVLEAAAEFGLDFEFEEAEVGGEAYDKHGEPLPEETLESLKKADAILFGAVGGPKWDP 81 (348)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCCCCC
T ss_conf 95589995789877889999999999866337743899950057899970998899999999758979983667887788
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCC--CCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCC
Q ss_conf 32112442211045898973296688305880487877888--7786799850566630010147778845999995488
Q gi|254780902|r 83 VKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLIPG--WKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDD 160 (412)
Q Consensus 83 ~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~~~~p~~~~~--~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~ 160 (412)
T Consensus 82 ~~-----~~~~~~ll~lRk~l~lyANlRP~--k~~~~~k~~~~~~~D~viVREnTeG~Y~G~~~~~~~~~---------- 144 (348)
T COG0473 82 LP-----RPERGLLLALRKELDLYANLRPA--KSLPGLKSPLVKGVDIVIVRENTEGLYFGEEGRILGGG---------- 144 (348)
T ss_pred CC-----CCCCCHHHHHHHHCCCEEEEEEC--CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC----------
T ss_conf 89-----76301578999863821540032--45799987666895089996388760148876545897----------
Q ss_pred CCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHC-CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 86102554124665301011105146889999999999865-99899997426777510899999999986310024542
Q gi|254780902|r 161 GQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALAR-QLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDE 239 (412)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~-~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~ 239 (412)
T Consensus 145 -------------eva~~~~~~Tr~~~eRI~r~AFe~A~~R~~kkvTsv~KaNVl~~s~~lwrev~~eva-~~------y 204 (348)
T COG0473 145 -------------EVAIDTKVITRKGSERIARFAFELARKRGRKKVTSVHKANVLKLSDGLWREVVEEVA-KE------Y 204 (348)
T ss_pred -------------EEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH-HC------C
T ss_conf -------------279998750088899999999999996079946898600105653678999999986-11------8
Q ss_pred CCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf 320002436999999985496651-8863210232678888775075323124312798751442122220345565542
Q gi|254780902|r 240 LGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQ 318 (412)
Q Consensus 240 ~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~i 318 (412)
T Consensus 205 Pdv~~~~~~VD~aam~lV~~P~~FDViVt~NlFGDILSD~aa~l~GslGl~PSAnig~~~~~~lfEPvHGSAPD-----I 279 (348)
T COG0473 205 PDVELDHMYVDAAAMQLVRNPEQFDVIVTSNLFGDILSDEAAALTGSLGLAPSANLGDERGPALFEPVHGSAPD-----I 279 (348)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-----C
T ss_conf 98614467488999998609320678977653168887688874376445765756998887303017887655-----4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHCCCCCCCCEEHHHHHHHHHHH
Q ss_conf 4877554727999999999998630257303899999999999999987-981632300157888713099999999999
Q gi|254780902|r 319 QGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVED-GFMTKDLALLIGPEQDWLSTTDFIEKISDN 397 (412)
Q Consensus 319 aGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~-G~~T~DLg~~~~~~~~~~~T~ef~daI~~~ 397 (412)
T Consensus 280 AGkgiA-NPiA~IlS~aMML~~~g~~-------~~A~~Ie~Av~~vl~~~g~~T~Dlg-------g~~~T~e~~d~I~~~ 344 (348)
T COG0473 280 AGKGIA-NPIATILSAAMMLRHLGEK-------EAADAIENAVEKVLAEGGIRTPDLG-------GNATTSEVGDAIAKA 344 (348)
T ss_pred CCCCCC-CHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHCCCCCCCCCC-------CCCCHHHHHHHHHHH
T ss_conf 688766-8499999999999986880-------6899999999999973897785558-------986689999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780902|r 398 LRD 400 (412)
Q Consensus 398 l~~ 400 (412)
T Consensus 345 l~~ 347 (348)
T COG0473 345 LAS 347 (348)
T ss_pred HHC
T ss_conf 734