HHsearch alignment for GI: 254780902 and conserved domain: TIGR00127
>TIGR00127 nadp_idh_euk isocitrate dehydrogenase, NADP-dependent; InterPro: IPR004790 Isocitrate dehydrogenase (IDH) , is an important enzyme of carbohydrate metabolism which catalyzes the oxidative decarboxylation of isocitrate into alpha-ketoglutarate. IDH is either dependent on NAD^+ (1.1.1.41 from EC) or on NADP^+ (1.1.1.42 from EC). In eukaryotes there are at least three isozymes of IDH: two are located in the mitochondrial matrix (one NAD^+-dependent, the other NADP^+-dependent), while the third one (also NADP^+-dependent) is cytoplasmic. In Escherichia coli the activity of a NADP^+-dependent form of the enzyme is controlled by the phosphorylation of a serine residue; the phosphorylated form of IDH is completely inactivated. The eukaryotic, NADP-dependent isocitrate dehydrogenases, are defined by this group that includes the cytosolic, mitochondrial, and chloroplast enzymes, but does also hit a small number of bacterial proteins.; GO: 0004450 isocitrate dehydrogenase (NADP+) activity.
Probab=100.00 E-value=0 Score=342.47 Aligned_cols=402 Identities=64% Similarity=1.119 Sum_probs=382.9
Q ss_pred CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 74011386799759863089999999998417998448998274899865286277899999986593887264489854
Q gi|254780902|r 2 KKIKVTKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA 81 (412)
Q Consensus 2 ~Kikm~~~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~ 81 (412)
T Consensus 1 ~~~~~~~p~~~~~gd~~~~~~w~~~~~~~~~p~~~~d~~~~d~~~~~~d~~~d~~~~~~~~~~~~~~~~~~c~~~~pd~~ 80 (413)
T TIGR00127 1 SKIKVANPVVELDGDELTRIIWELIKDKLILPYLDLDLKYYDLGLEYRDATNDKVTVDAAEATLKYGVGVKCATITPDEA 80 (413)
T ss_pred CCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHH
T ss_conf 94334563021165236789999865323010111000000035553333331112334556654123024441075234
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCC-
Q ss_conf 4321124422110458989732966883058804878778887786799850566630010147778845999995488-
Q gi|254780902|r 82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLIPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDD- 160 (412)
Q Consensus 82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~~~~p~~~~~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~- 160 (412)
T Consensus 81 ~~~~~~~~~~w~~p~g~~~~~~gg~~~~~~~~~~~~p~~~~~w~~p~~~g~~~~gd~~~~~d~~~~gpg~~~~~~~p~~p 160 (413)
T TIGR00127 81 RVEEFGLKKLWKSPNGTIRNILGGTVFREPIICPNIPRLVPGWEKPIIIGRHAFGDQYKATDTVVPGPGKLELVYKPKDP 160 (413)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHCCHHCCCCCHHCCCCCCCEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCC
T ss_conf 45553123430477730344313301102100012200112222322430212354211122010577615788703787
Q ss_pred --CCCEEEEEECCCCCC-EEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf --861025541246653-01011105146889999999999865998999974267775108999999999863100245
Q gi|254780902|r 161 --GQTIEKEVFDSPGSG-IAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQF 237 (412)
Q Consensus 161 --g~~~~~~~~~~~~~~-~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~ 237 (412)
T Consensus 161 ~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~dg~~~d~~~~~~~~~~~~~~ 240 (413)
T TIGR00127 161 TGGEPVDLKVYDFPGGGGVALALYNTDESIEGFAHASFELALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGYKSKF 240 (413)
T ss_pred CCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 76642046786225767336653044112445555445544421554000110012322044257889998753444344
Q ss_pred CCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 42320002436999999985496651886321023267888877507532312431279875144212222034556554
Q gi|254780902|r 238 DELGITYTHRLIDDMVASSIKWSGGYIWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQH 317 (412)
Q Consensus 238 ~~~~i~~~~~~vD~~~~~lv~~P~~fVivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~ 317 (412)
T Consensus 241 ~~~~~w~~~~~~dd~~~~~~~~~gg~~~~~~~~dgd~~~d~~~~g~g~~g~~~~~~~~pdg~~~~~~~~~g~~~~~~~~~ 320 (413)
T TIGR00127 241 EALGIWYEHRLIDDLVAQALKSEGGFIWACKNYDGDVQSDIVAQGFGSLGLLTSVLVCPDGKTFEAEAAHGTVTRHFRKY 320 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHEEEEECCCCCCCCCHHCCCHHHHHHHHH
T ss_conf 55311234556678899886326864898506676300012330233000000124446874100000011134445543
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHCCCCC-----CCCEEHHHHH
Q ss_conf 24877554727999999999998630257303899999999999999987-98163230015788-----8713099999
Q gi|254780902|r 318 QQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVED-GFMTKDLALLIGPE-----QDWLSTTDFI 391 (412)
Q Consensus 318 iaGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~-G~~T~DLg~~~~~~-----~~~~~T~ef~ 391 (412)
T Consensus 321 ~~g~~~~~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~p~~~~~~~~~~~~~~ 400 (413)
T TIGR00127 321 QKGGETSTNSIASIFAWTRGLAHRGKLDNNPELLKFANILESACLNTVEEDGILTKDLALILGGSPNLERSAYLNTEEFL 400 (413)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 13553332103555554443443202466235788877776666433320342134478874277552123320158888
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999998
Q gi|254780902|r 392 EKISDNLRDALQ 403 (412)
Q Consensus 392 daI~~~l~~~l~ 403 (412)
T Consensus 401 d~~~~~~~~~~~ 412 (413)
T TIGR00127 401 DAVEERLKKKLS 412 (413)
T ss_pred HHHHHHHHHHHC
T ss_conf 888887776523