HHsearch alignment for GI: 254780902 and conserved domain: TIGR00183
>TIGR00183 prok_nadp_idh isocitrate dehydrogenase, NADP-dependent; InterPro: IPR004439 Several NAD- or NADP-dependent dehydrogenases, including 3-isopropylmalate dehydrogenase, tartrate dehydrogenase, and the multimeric forms of isocitrate dehydrogenase, share a nucleotide binding domain unrelated to that of lactate dehydrogenase and its homologs. These enzymes dehydrogenate their substates at a H-C-OH site adjacent to a H-C-COOH site; the latter carbon, now adjacent to a carbonyl group, readily decarboxylates. Prokaryotic NADP-dependent isocitrate dehydrogenases (1.1.1.42 from EC) resemble their NAD-dependent counterparts and 3-isopropylmalate dehydrogenase (an NAD-dependent enzyme) more closely than they resemble eukaryotic NADP-dependent isocitrate dehydrogenases.; GO: 0004450 isocitrate dehydrogenase (NADP+) activity, 0006099 tricarboxylic acid cycle.
Probab=100.00 E-value=0 Score=386.93 Aligned_cols=371 Identities=22% Similarity=0.233 Sum_probs=312.7
Q ss_pred CCCE-EEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEEEECCHHHHHHHC---------CCCCHHHHHHHHHCCE
Q ss_conf 3867-99759863089999999998417-------99844899827489986528---------6277899999986593
Q gi|254780902|r 7 TKPV-VSLDGDEMTRIIWQLIQENLIHP-------YLDIKIEYFDLSIQNRDLTD---------DQVTIDAAHAIKNCGV 69 (412)
Q Consensus 7 ~~~I-v~l~GDgiG~Ei~~~~l~vl~~~-------~~~i~~e~~d~G~~~~d~tg---------~~l~~da~eaik~~~v 69 (412)
T Consensus 25 ~~p~~p~~~gdg~g~d~~p~~~~~~~~~~~~~~~g~~~~~w~~~~~g~~~~~~~g~~~~~~p~~~~lp~~~~~~~~~~~~ 104 (483)
T TIGR00183 25 NNPIIPYIEGDGIGVDVWPAALKVLDAAVEKAYKGEKKISWFEVYAGEKAYELYGDYKELSPEDEWLPADTLDAIKEYRV 104 (483)
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCHHHCCCCHHCCCHHHHHHHHHHHH
T ss_conf 87521012167666202467899888877753155200132211015224443032122264012043468888876311
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCCCC-CCCEEEEECCCCCCCCCCEEEEC
Q ss_conf 8872644898544321124422110458989732966883058-804878778887-78679985056663001014777
Q gi|254780902|r 70 GIKCATITADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIPGW-KKPIIIGRHAFGDQYRATDFQFP 147 (412)
Q Consensus 70 ~lkg~~~tP~~~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~~~-~~divivREnteg~Y~gie~~~~ 147 (412)
T Consensus 105 ~~~gpl~~p---------~ggg~~~l~~~~~~~~dl~~~~~p~~~~~g~p~p~~~p~~~~~~~~~~~~~d~~~g~~w~~g 175 (483)
T TIGR00183 105 AIKGPLTTP---------VGGGIRSLNVALRQELDLYVCLRPVRYYPGTPSPVKHPEKVDLVIFRENTEDIYAGIEWAEG 175 (483)
T ss_pred HCCCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCC
T ss_conf 103543444---------45531345567777765665420012037887645572202046761464112102223355
Q ss_pred CCCEEEEE-EECCCCCCEEEEEEC--CCCCCEEEEEECCHHHHHHHHHHHHHHHHHC--CC-CEEEEECHHHHHHHHHHH
Q ss_conf 88459999-954888610255412--4665301011105146889999999999865--99-899997426777510899
Q gi|254780902|r 148 SKGKLILK-FVGDDGQTIEKEVFD--SPGSGIAMAMYNLDDSIRNFARAAMQYALAR--QL-PLYLSTKDTILKSYDGRF 221 (412)
Q Consensus 148 ~~~~~~i~-~~~~~g~~~~~~~~~--~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~--~~-kvt~v~KaNVlk~tdglf 221 (412)
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~g~~p~~~~g~~~l~~~~~~~~~~~p~~~~~~~~~~~g~~~~~~~g~~ 255 (483)
T TIGR00183 176 SEEAKKLIAFLKNELGVKKIRFPEKQIRLDSGIGIKPISEEGTKRLVRAAIEYAIENPKDRKSVTLVHKGNIMKFTEGAF 255 (483)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHH
T ss_conf 26789999998753033321244012000046653323213578999999998861655554156643365100000023
Q ss_pred HHHHHHHHHHHCCCCCC-------------------------------------------------------------CC
Q ss_conf 99999998631002454-------------------------------------------------------------23
Q gi|254780902|r 222 KNIFNEIFEAEFKNQFD-------------------------------------------------------------EL 240 (412)
Q Consensus 222 ~~~~~eva~~~~~~~~~-------------------------------------------------------------~~ 240 (412)
T Consensus 256 ~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 335 (483)
T TIGR00183 256 RDWGYELAKKEFGAECITEREEWGPWDKLGNPDLTIEANAHLIPPGKDTLTEEKQAVIKQEVEQVLNSIWESHGNGEWKG 335 (483)
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 33225666554200120010001221113674204411210145541122345677888889999887652023200100
Q ss_pred CEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHC
Q ss_conf 20002436999999985496651-88632102326788887750753231243127987514421222203455655424
Q gi|254780902|r 241 GITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQQ 319 (412)
Q Consensus 241 ~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~ia 319 (412)
T Consensus 336 ~~~~~d~~~d~~~~~~~~~p~~~~~~~~~~l~gd~~~d~~~~~~gg~g~~pg~~~~~~~~~~~~~~~~g~~p~~-----~ 410 (483)
T TIGR00183 336 KIVVKDRIADAFLQQILTRPDEYDVLATLNLNGDYLSDALAALVGGLGIAPGANIGDEVGHALFEATHGTAPKY-----A 410 (483)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC-----C
T ss_conf 01224567788899875065411033410467303355677764233236776544101122210013556210-----3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC-CCCCEEHHHHHHHHHHHH
Q ss_conf 8775547279999999999986302573038999999999999999879816323001578-887130999999999999
Q gi|254780902|r 320 GKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGP-EQDWLSTTDFIEKISDNL 398 (412)
Q Consensus 320 Gk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~-~~~~~~T~ef~daI~~~l 398 (412)
T Consensus 411 g~~~-~~p~~~~l~~~~~~~~~g-------w~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~ 482 (483)
T TIGR00183 411 GLDK-VNPGSVILSGELLLEHLG-------WKEAADLIKKGLEKAIASKVVTYDFARLMDGKVAKELKCSEFGEALVENL 482 (483)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 4334-563046667778887505-------01467898876544432010222256541641000111346788887405
Q ss_pred H
Q ss_conf 9
Q gi|254780902|r 399 R 399 (412)
Q Consensus 399 ~ 399 (412)
T Consensus 483 ~ 483 (483)
T TIGR00183 483 D 483 (483)
T ss_pred C
T ss_conf 9