HHsearch alignment for GI: 254780902 and conserved domain: pfam04166
>pfam04166 PdxA Pyridoxal phosphate biosynthetic protein PdxA. In Escherichia coli the coenzyme pyridoxal 5'-phosphate is synthesized de novo by a pathway that is thought to involve the condensation of 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose, catalysed by the enzymes PdxA and PdxJ, to form either pyridoxine (vitamin B6) or pyridoxine 5'-phosphate.
Probab=95.82 E-value=0.011 Score=36.09 Aligned_cols=76 Identities=21% Similarity=0.121 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 36999999985496651-88632102326788887750753231243127987514421222203455655424877554
Q gi|254780902|r 247 RLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQQGKETST 325 (412)
Q Consensus 247 ~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~iaGk~iA~ 325 (412)
T Consensus 221 ~paDt~F~~~--~~~~~D~v~a--mYH----DQglip~K~~~f~~~vn~t~GLp~irtS~dHGta~d-----iagk~~A- 286 (299)
T pfam04166 221 LPADTAFRPV--LLGRYDAVLA--MYH----DQGLIPLKYLGFDRGVNVTLGLPIIRTSVDHGTAFD-----IAGKGKA- 286 (299)
T ss_pred CCCHHHHHHH--HCCCCCEEEE--ECC----CCCCHHHHHCCCCCCEEEECCCCEEEECCCCCCHHH-----HHCCCCC-
T ss_conf 7943776541--1057899998--052----442076653356873799448992377899870566-----6078989-
Q ss_pred CHHHHHHHHHH
Q ss_conf 72799999999
Q gi|254780902|r 326 NSIASIFAWTR 336 (412)
Q Consensus 326 NP~a~IlS~am 336 (412)
T Consensus 287 ~~~s~~~Ai~~ 297 (299)
T pfam04166 287 DPGSLIAALKL 297 (299)
T ss_pred CHHHHHHHHHH
T ss_conf 96999999997