HHsearch results for GI: 254780902 and protein with PDBid: 1cnz_A

>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00  E-value=0  Score=726.84  Aligned_cols=350  Identities=18%  Similarity=0.160  Sum_probs=308.1

Q ss_pred             CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCC
Q ss_conf             974011386799759863089999999998417----9984489982748998652862778999999865938872644
Q gi|254780902|r    1 MKKIKVTKPVVSLDGDEMTRIIWQLIQENLIHP----YLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATI   76 (412)
Q Consensus         1 m~Kikm~~~Iv~l~GDgiG~Ei~~~~l~vl~~~----~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~   76 (412)
                      |+|   +.+|++|||||||||||+++++||++.    .++++|+++++|.++|++||+++|+++++++++++++||||++
T Consensus         1 Msk---~ykI~vipGDGIGpEv~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~~t~~~~~~~~a~l~g~~~   77 (363)
T 1cnz_A            1 MSK---NYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVG   77 (363)
T ss_dssp             CCC---CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECC
T ss_pred             CCC---CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCC
T ss_conf             999---86599988788879999999999999876609825999996238799975997889999999850411572346


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCC------CCCCCCEEEEECCCCCCCCCCEEEECCC
Q ss_conf             898544321124422110458989732966883058-804878778------8877867998505666300101477788
Q gi|254780902|r   77 TADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLI------PGWKKPIIIGRHAFGDQYRATDFQFPSK  149 (412)
Q Consensus        77 tP~~~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~------~~~~~divivREnteg~Y~gie~~~~~~  149 (412)
                      +|.+++.+..  ..+.+|+|++||+.||||+|+||+ .+++++...      ...++|++|+||||||+|+|.++....+
T Consensus        78 ~p~~~~~~~~--~~~~~s~~~~lR~~ldlyanvRp~~~~~g~~~~~~~~~~~~~~~vD~vivRenteg~Y~~~~~~~~~~  155 (363)
T 1cnz_A           78 GPKWENLPPE--SQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGS  155 (363)
T ss_dssp             CGGGTTSCGG--GSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECC
T ss_pred             CCCCCCCCCC--CCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEECCC
T ss_conf             8887778866--66441368999998288367677773036543468865548899139999966686114666301268


Q ss_pred             CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf             45999995488861025541246653010111051468899999999998659989999742677751089999999998
Q gi|254780902|r  150 GKLILKFVGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIF  229 (412)
Q Consensus       150 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva  229 (412)
                      ..                     .+.+..+..+|+.+++||+|+||+||++|++|||++||+|||| ++++|+++++|++
T Consensus       156 ~~---------------------~~~~~~~~~~t~~~~~Ri~r~Af~~A~~~~kkVt~v~K~Nilk-~~~lf~~~~~eva  213 (363)
T 1cnz_A          156 GQ---------------------YEKAFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDVA  213 (363)
T ss_dssp             GG---------------------GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH
T ss_pred             CC---------------------EEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CHHHHHHHHHHHH
T ss_conf             85---------------------0699865886389999999999999996799689995586443-1688999999986


Q ss_pred             HHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCC
Q ss_conf             6310024542320002436999999985496651-886321023267888877507532312431279875144212222
Q gi|254780902|r  230 EAEFKNQFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHG  308 (412)
Q Consensus       230 ~~~~~~~~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HG  308 (412)
                      ++       ||+|+++++++|++|||||++|++| ||||+|||||||||++|+++||+|++||+|+|+++ ++||||+||
T Consensus       214 ~~-------yp~i~~~~~~vD~~~~~lv~~P~~fdViv~~Nl~GDIlSD~~a~l~GglGl~~s~nig~~~-~a~fEp~HG  285 (363)
T 1cnz_A          214 KT-------YPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGG  285 (363)
T ss_dssp             TT-------CTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSC
T ss_pred             CC-------CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEECCCC-CEEECCCCC
T ss_conf             22-------8974885144669999985086668778545325889999998843997657742446987-368606788


Q ss_pred             CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEH
Q ss_conf             03455655424877554727999999999998-63025730389999999999999998798163230015788871309
Q gi|254780902|r  309 TVTRHYRQHQQGKETSTNSIASIFAWTRGLLH-RAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLST  387 (412)
Q Consensus       309 SAPd~~g~~iaGk~iA~NP~a~IlS~ammL~h-lg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T  387 (412)
                      ||||     |||||+| ||+|||||++|||+| +|       +.++|++|++||.+|+++|++|+||++    ..+.+||
T Consensus       286 sapd-----iaGk~~a-NP~a~IlS~ammL~~~lg-------~~~~A~~ie~Av~~~l~~G~~T~Dl~~----~~~~~sT  348 (363)
T 1cnz_A          286 SAPD-----IAGKNIA-NPIAQILSLALLLRYSLD-------ANDAATAIEQAINRALEEGVRTGDLAR----GAAAVST  348 (363)
T ss_dssp             CCGG-----GTTTTCS-CCHHHHHHHHHHHHHHSS-------CHHHHHHHHHHHHHHHHTTCCCGGGTT----TTTCCCH
T ss_pred             CCCC-----CCCCCCC-CCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCCH
T ss_conf             7300-----1688866-939999999999974189-------879999999999999976995745358----9974899


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254780902|r  388 TDFIEKISDNLRDAL  402 (412)
Q Consensus       388 ~ef~daI~~~l~~~l  402 (412)
                      +||+|+|+++|++.|
T Consensus       349 ~e~~dai~~~i~~~~  363 (363)
T 1cnz_A          349 DEMGDIIARYVAEGV  363 (363)
T ss_dssp             HHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999986129