HHsearch results for GI: 254780902 and protein with PDBid: 1cnz_A
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=0 Score=726.84 Aligned_cols=350 Identities=18% Similarity=0.160 Sum_probs=308.1
Q ss_pred CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCC
Q ss_conf 974011386799759863089999999998417----9984489982748998652862778999999865938872644
Q gi|254780902|r 1 MKKIKVTKPVVSLDGDEMTRIIWQLIQENLIHP----YLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATI 76 (412)
Q Consensus 1 m~Kikm~~~Iv~l~GDgiG~Ei~~~~l~vl~~~----~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~ 76 (412)
|+| +.+|++|||||||||||+++++||++. .++++|+++++|.++|++||+++|+++++++++++++||||++
T Consensus 1 Msk---~ykI~vipGDGIGpEv~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~~t~~~~~~~~a~l~g~~~ 77 (363)
T 1cnz_A 1 MSK---NYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVG 77 (363)
T ss_dssp CCC---CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECC
T ss_pred CCC---CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCC
T ss_conf 999---86599988788879999999999999876609825999996238799975997889999999850411572346
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCC------CCCCCCEEEEECCCCCCCCCCEEEECCC
Q ss_conf 898544321124422110458989732966883058-804878778------8877867998505666300101477788
Q gi|254780902|r 77 TADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLI------PGWKKPIIIGRHAFGDQYRATDFQFPSK 149 (412)
Q Consensus 77 tP~~~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~------~~~~~divivREnteg~Y~gie~~~~~~ 149 (412)
+|.+++.+.. ..+.+|+|++||+.||||+|+||+ .+++++... ...++|++|+||||||+|+|.++....+
T Consensus 78 ~p~~~~~~~~--~~~~~s~~~~lR~~ldlyanvRp~~~~~g~~~~~~~~~~~~~~~vD~vivRenteg~Y~~~~~~~~~~ 155 (363)
T 1cnz_A 78 GPKWENLPPE--SQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGS 155 (363)
T ss_dssp CGGGTTSCGG--GSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECC
T ss_pred CCCCCCCCCC--CCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCEECCC
T ss_conf 8887778866--66441368999998288367677773036543468865548899139999966686114666301268
Q ss_pred CEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf 45999995488861025541246653010111051468899999999998659989999742677751089999999998
Q gi|254780902|r 150 GKLILKFVGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIF 229 (412)
Q Consensus 150 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva 229 (412)
.. .+.+..+..+|+.+++||+|+||+||++|++|||++||+|||| ++++|+++++|++
T Consensus 156 ~~---------------------~~~~~~~~~~t~~~~~Ri~r~Af~~A~~~~kkVt~v~K~Nilk-~~~lf~~~~~eva 213 (363)
T 1cnz_A 156 GQ---------------------YEKAFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDVA 213 (363)
T ss_dssp GG---------------------GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH
T ss_pred CC---------------------EEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CHHHHHHHHHHHH
T ss_conf 85---------------------0699865886389999999999999996799689995586443-1688999999986
Q ss_pred HHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCC
Q ss_conf 6310024542320002436999999985496651-886321023267888877507532312431279875144212222
Q gi|254780902|r 230 EAEFKNQFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHG 308 (412)
Q Consensus 230 ~~~~~~~~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HG 308 (412)
++ ||+|+++++++|++|||||++|++| ||||+|||||||||++|+++||+|++||+|+|+++ ++||||+||
T Consensus 214 ~~-------yp~i~~~~~~vD~~~~~lv~~P~~fdViv~~Nl~GDIlSD~~a~l~GglGl~~s~nig~~~-~a~fEp~HG 285 (363)
T 1cnz_A 214 KT-------YPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGG 285 (363)
T ss_dssp TT-------CTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSC
T ss_pred CC-------CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEECCCC-CEEECCCCC
T ss_conf 22-------8974885144669999985086668778545325889999998843997657742446987-368606788
Q ss_pred CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEH
Q ss_conf 03455655424877554727999999999998-63025730389999999999999998798163230015788871309
Q gi|254780902|r 309 TVTRHYRQHQQGKETSTNSIASIFAWTRGLLH-RAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLST 387 (412)
Q Consensus 309 SAPd~~g~~iaGk~iA~NP~a~IlS~ammL~h-lg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T 387 (412)
|||| |||||+| ||+|||||++|||+| +| +.++|++|++||.+|+++|++|+||++ ..+.+||
T Consensus 286 sapd-----iaGk~~a-NP~a~IlS~ammL~~~lg-------~~~~A~~ie~Av~~~l~~G~~T~Dl~~----~~~~~sT 348 (363)
T 1cnz_A 286 SAPD-----IAGKNIA-NPIAQILSLALLLRYSLD-------ANDAATAIEQAINRALEEGVRTGDLAR----GAAAVST 348 (363)
T ss_dssp CCGG-----GTTTTCS-CCHHHHHHHHHHHHHHSS-------CHHHHHHHHHHHHHHHHTTCCCGGGTT----TTTCCCH
T ss_pred CCCC-----CCCCCCC-CCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCCH
T ss_conf 7300-----1688866-939999999999974189-------879999999999999976995745358----9974899
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780902|r 388 TDFIEKISDNLRDAL 402 (412)
Q Consensus 388 ~ef~daI~~~l~~~l 402 (412)
+||+|+|+++|++.|
T Consensus 349 ~e~~dai~~~i~~~~ 363 (363)
T 1cnz_A 349 DEMGDIIARYVAEGV 363 (363)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999986129