HHsearch results for GI: 254780902 and protein with PDBid: 1lwd_A

>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00  E-value=0  Score=848.31  Aligned_cols=403  Identities=62%  Similarity=1.063  Sum_probs=382.9

Q ss_pred             CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf             74011386799759863089999999998417998448998274899865286277899999986593887264489854
Q gi|254780902|r    2 KKIKVTKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA   81 (412)
Q Consensus         2 ~Kikm~~~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~   81 (412)
                      +||||+||||+|+|||||||||+.++++|+.+++||+|++||+|+++|++||+++|+|+++++|+++++||||++||+|+
T Consensus         3 ~ki~v~~piv~l~GDe~~~~i~~~i~~~~~~~~~di~~~~~d~g~~~~~~tg~~lp~e~lea~k~~~a~LkGav~tP~~~   82 (413)
T 1lwd_A            3 QRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEA   82 (413)
T ss_dssp             CCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHH
T ss_pred             CCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCHH
T ss_conf             65214777699559636899999999986067877438996566789987499787999999997496898871689734


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCC
Q ss_conf             43211244221104589897329668830588048787788877867998505666300101477788459999954888
Q gi|254780902|r   82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLIPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDG  161 (412)
Q Consensus        82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~~~~p~~~~~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~g  161 (412)
                      +..+..++++++|+|++||+.||||+|+||+.+.+.++...++++|+||+||||||+|+|+||.+.++++..++++.+.|
T Consensus        83 ~~~~~~~~~~~~s~n~~lR~~ldlyaniRP~~~~~~~~~~~~~~~d~vivREntEg~Y~g~e~~~~~~~~~~~~~~~~~g  162 (413)
T 1lwd_A           83 RVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDG  162 (413)
T ss_dssp             HHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTC
T ss_pred             HCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCEEEEEEECCCC
T ss_conf             22444555332250178998648743775000478887668887666870466306984003684688616899962577


Q ss_pred             CC-EEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             61-02554124665301011105146889999999999865998999974267775108999999999863100245423
Q gi|254780902|r  162 QT-IEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDEL  240 (412)
Q Consensus       162 ~~-~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~~  240 (412)
                      .. .....+......++.++++++.+++||+|+||++|+.|+++||++||+|||+.|||+|+++++|++++||+.++.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~ri~r~af~~A~~~r~kvt~v~KaNv~~~~dglf~~~~~eva~~~~~~~~~~~  242 (413)
T 1lwd_A          163 SSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKY  242 (413)
T ss_dssp             CCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred             CCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             51121133202677413545640038899999999999855974478860563231334899999999987300134304


Q ss_pred             CEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHH-HHC
Q ss_conf             2000243699999998549665188632102326788887750753231243127987514421222203455655-424
Q gi|254780902|r  241 GITYTHRLIDDMVASSIKWSGGYIWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQ-HQQ  319 (412)
Q Consensus       241 ~i~~~~~~vD~~~~~lv~~P~~fVivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~-~ia  319 (412)
                      +|+++++++|+++|+++++|++|||||+|||||||||++|+++|||||+||+|+|+++..++|||+|||||||+|| +|+
T Consensus       243 ~I~~~~~~~d~~~~~lv~~~~~dVivt~NlfGDILSDlaa~l~GslGl~pSanig~~~~~~~~E~~hgsap~~~ga~dia  322 (413)
T 1lwd_A          243 KIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKG  322 (413)
T ss_dssp             TCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHHTT
T ss_pred             EEEEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCHHHHC
T ss_conf             89962456788878741798771999745212577767787538855455431279987225515768624204245406


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC------CCCCCCEEHHHHHHH
Q ss_conf             87755472799999999999863025730389999999999999998798163230015------788871309999999
Q gi|254780902|r  320 GKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLI------GPEQDWLSTTDFIEK  393 (412)
Q Consensus       320 Gk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~------~~~~~~~~T~ef~da  393 (412)
                      |||+| ||+|||||++|||+|+|+.|.++++.++|++|++||.+|+++|++|+|||+..      .+....+||+||+||
T Consensus       323 gk~iA-NP~A~IlS~amML~~lg~~~~~~~l~~aA~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~tT~ef~da  401 (413)
T 1lwd_A          323 RPTST-NPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDT  401 (413)
T ss_dssp             CCCCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHHH
T ss_pred             CCCCC-CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             87632-87999999999999734655545799999999999999996799884658876666555556676289999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999873
Q gi|254780902|r  394 ISDNLRDALQKN  405 (412)
Q Consensus       394 I~~~l~~~l~~~  405 (412)
                      |++||+++|+++
T Consensus       402 V~~~L~~~L~~~  413 (413)
T 1lwd_A          402 IKSNLDRALGRQ  413 (413)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCC
T ss_conf             999999987439