HHsearch results for GI: 254780902 and protein with PDBid: 1lwd_A
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=0 Score=848.31 Aligned_cols=403 Identities=62% Similarity=1.063 Sum_probs=382.9
Q ss_pred CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 74011386799759863089999999998417998448998274899865286277899999986593887264489854
Q gi|254780902|r 2 KKIKVTKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA 81 (412)
Q Consensus 2 ~Kikm~~~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~ 81 (412)
+||||+||||+|+|||||||||+.++++|+.+++||+|++||+|+++|++||+++|+|+++++|+++++||||++||+|+
T Consensus 3 ~ki~v~~piv~l~GDe~~~~i~~~i~~~~~~~~~di~~~~~d~g~~~~~~tg~~lp~e~lea~k~~~a~LkGav~tP~~~ 82 (413)
T 1lwd_A 3 QRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEA 82 (413)
T ss_dssp CCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHH
T ss_pred CCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCHH
T ss_conf 65214777699559636899999999986067877438996566789987499787999999997496898871689734
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCC
Q ss_conf 43211244221104589897329668830588048787788877867998505666300101477788459999954888
Q gi|254780902|r 82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLIPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDG 161 (412)
Q Consensus 82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~~~~p~~~~~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~g 161 (412)
+..+..++++++|+|++||+.||||+|+||+.+.+.++...++++|+||+||||||+|+|+||.+.++++..++++.+.|
T Consensus 83 ~~~~~~~~~~~~s~n~~lR~~ldlyaniRP~~~~~~~~~~~~~~~d~vivREntEg~Y~g~e~~~~~~~~~~~~~~~~~g 162 (413)
T 1lwd_A 83 RVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDG 162 (413)
T ss_dssp HHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTC
T ss_pred HCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCEEEEEEECCCC
T ss_conf 22444555332250178998648743775000478887668887666870466306984003684688616899962577
Q ss_pred CC-EEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 61-02554124665301011105146889999999999865998999974267775108999999999863100245423
Q gi|254780902|r 162 QT-IEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDEL 240 (412)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~~ 240 (412)
.. .....+......++.++++++.+++||+|+||++|+.|+++||++||+|||+.|||+|+++++|++++||+.++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~ri~r~af~~A~~~r~kvt~v~KaNv~~~~dglf~~~~~eva~~~~~~~~~~~ 242 (413)
T 1lwd_A 163 SSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKY 242 (413)
T ss_dssp CCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred CCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 51121133202677413545640038899999999999855974478860563231334899999999987300134304
Q ss_pred CEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHH-HHC
Q ss_conf 2000243699999998549665188632102326788887750753231243127987514421222203455655-424
Q gi|254780902|r 241 GITYTHRLIDDMVASSIKWSGGYIWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQ-HQQ 319 (412)
Q Consensus 241 ~i~~~~~~vD~~~~~lv~~P~~fVivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~-~ia 319 (412)
+|+++++++|+++|+++++|++|||||+|||||||||++|+++|||||+||+|+|+++..++|||+|||||||+|| +|+
T Consensus 243 ~I~~~~~~~d~~~~~lv~~~~~dVivt~NlfGDILSDlaa~l~GslGl~pSanig~~~~~~~~E~~hgsap~~~ga~dia 322 (413)
T 1lwd_A 243 KIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKG 322 (413)
T ss_dssp TCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHHTT
T ss_pred EEEEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCHHHHC
T ss_conf 89962456788878741798771999745212577767787538855455431279987225515768624204245406
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC------CCCCCCEEHHHHHHH
Q ss_conf 87755472799999999999863025730389999999999999998798163230015------788871309999999
Q gi|254780902|r 320 GKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLI------GPEQDWLSTTDFIEK 393 (412)
Q Consensus 320 Gk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~------~~~~~~~~T~ef~da 393 (412)
|||+| ||+|||||++|||+|+|+.|.++++.++|++|++||.+|+++|++|+|||+.. .+....+||+||+||
T Consensus 323 gk~iA-NP~A~IlS~amML~~lg~~~~~~~l~~aA~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~tT~ef~da 401 (413)
T 1lwd_A 323 RPTST-NPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDT 401 (413)
T ss_dssp CCCCC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHHH
T ss_pred CCCCC-CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 87632-87999999999999734655545799999999999999996799884658876666555556676289999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999873
Q gi|254780902|r 394 ISDNLRDALQKN 405 (412)
Q Consensus 394 I~~~l~~~l~~~ 405 (412)
|++||+++|+++
T Consensus 402 V~~~L~~~L~~~ 413 (413)
T 1lwd_A 402 IKSNLDRALGRQ 413 (413)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999987439