HHsearch results for GI: 254780902 and protein with PDBid: 1tyo_A

>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00  E-value=0  Score=721.13  Aligned_cols=364  Identities=19%  Similarity=0.161  Sum_probs=308.3

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf             86799759863089999999998417-------99844899827489986528627789999998659388726448985
Q gi|254780902|r    8 KPVVSLDGDEMTRIIWQLIQENLIHP-------YLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQ   80 (412)
Q Consensus         8 ~~Iv~l~GDgiG~Ei~~~~l~vl~~~-------~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~   80 (412)
                      ++|.+|||||||||||+++++||++.       .++++|.++++|.++++++|+++|+++++++++++++||||+++|.+
T Consensus        36 p~IavIpGDGIGpEV~~~a~~VL~a~~~~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~t~~~i~~~da~l~Ga~~~P~~  115 (435)
T 1tyo_A           36 PVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPVG  115 (435)
T ss_dssp             BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCSHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCTT
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
T ss_conf             88999797864199999999999999988617888867999715466898659887799999998629799898879999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCC-CCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECC
Q ss_conf             44321124422110458989732966883058804878778-88778679985056663001014777884599999548
Q gi|254780902|r   81 ARVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLI-PGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGD  159 (412)
Q Consensus        81 ~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~~~~p~~~-~~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~  159 (412)
                      .         +++|+|++||+.||||+|+||+.+.+.|.+. ...++|+|||||||||+|+|+||....+....+..   
T Consensus       116 ~---------~~~s~~l~LRk~ldlyaNvRP~r~~~~~~~~~~~~~iDivIVREntEG~Y~g~e~~~~~~~~~~~~~---  183 (435)
T 1tyo_A          116 T---------GYRSLNVAIRQALDLYANIRPVRYYGQPAPHKYADRVDMVIFRENTEDVYAGIEWPHDSPEAARIRR---  183 (435)
T ss_dssp             S---------CTTHHHHHHHHHHTCCEEEEEEECCSCCCSBTTGGGCEEEEEEECSSSGGGCCEECTTSHHHHHHHH---
T ss_pred             C---------CCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE---
T ss_conf             8---------9666058899875995987666325788775666778869995277775467665556755421020---


Q ss_pred             CCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC---
Q ss_conf             88610255412466530101110514688999999999986599-89999742677751089999999998631002---
Q gi|254780902|r  160 DGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQL-PLYLSTKDTILKSYDGRFKNIFNEIFEAEFKN---  235 (412)
Q Consensus       160 ~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~-kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~---  235 (412)
                       +...+. ...........++.+|+.+++|++|+||+||++|++ +||++||+|||+.|+|+|++|+++++.++|++   
T Consensus       184 -~~~~~~-~~~~~~~~a~~~~~itr~~~~Ri~r~Af~~A~~r~rk~vt~v~KaNv~~~t~glf~~~~~eva~~~f~~~~~  261 (435)
T 1tyo_A          184 -FLAEEF-GISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAYEVALEKFREHVV  261 (435)
T ss_dssp             -HHHHHH-CCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTTTSTTTHHHHHHHHHHHHHHHSGGGEE
T ss_pred             -CCHHHH-CEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             -350330-331145405888997557789999998999986489808999588610010216999999999877533100


Q ss_pred             -----------CCCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEE
Q ss_conf             -----------4542320002436999999985496651-8863210232678888775075323124312798751442
Q gi|254780902|r  236 -----------QFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMET  303 (412)
Q Consensus       236 -----------~~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mf  303 (412)
                                 .+..++|+++|+|||++|||||++|++| ||||+|||||||||++|+++|||||+||+|+|++  ++||
T Consensus       262 ~~~~~~~~yp~v~~e~~I~~~~~~vD~~a~~lv~~P~~fDVivt~NlfGDILSDlaa~l~GglGl~pSan~g~~--~a~f  339 (435)
T 1tyo_A          262 TEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAGMNMGDG--IAVA  339 (435)
T ss_dssp             EHHHHHHHSTTCCCTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECSS--CEEE
T ss_pred             HHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC--CEEE
T ss_conf             25778875477675652489653677999998239644757985330367888999887447775567567998--2798


Q ss_pred             CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
Q ss_conf             12222034556554248775547279999999999-98630257303899999999999999987981632300157888
Q gi|254780902|r  304 EAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGL-LHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQ  382 (412)
Q Consensus       304 Ep~HGSAPd~~g~~iaGk~iA~NP~a~IlS~ammL-~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~  382 (412)
                      ||+||||||     |||||+| ||+|||||++||| +|+|       +.++|++|++||.+++++|++|+|||+.. .+.
T Consensus       340 EpvHGSAPd-----iaGk~iA-NPia~IlS~amML~~~lg-------~~~~A~~ie~Av~~vl~~g~~T~Dlgg~~-~~~  405 (435)
T 1tyo_A          340 EPVHGTAPK-----YAGKDLI-NPSAEILSASLLIGEFMG-------WREVKSIVEYAIRKAVQSKKVTQDLARHM-PGV  405 (435)
T ss_dssp             EESSCCCGG-----GTTSSCS-CCHHHHHHHHHHHHTTSC-------CHHHHHHHHHHHHHHHHTTCCBHHHHTTS-TTC
T ss_pred             ECCCCCCCC-----CCCCCCC-CHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CCC
T ss_conf             689887300-----0699853-919999999999998769-------88999999999999997699460006788-899


Q ss_pred             CCEEHHHHHHHHHHHHHHH
Q ss_conf             7130999999999999999
Q gi|254780902|r  383 DWLSTTDFIEKISDNLRDA  401 (412)
Q Consensus       383 ~~~~T~ef~daI~~~l~~~  401 (412)
                      +.++|+||+|||+++|++.
T Consensus       406 ~~~~T~e~~daVi~~l~~~  424 (435)
T 1tyo_A          406 QPLRTSEYTETLIAYIDEA  424 (435)
T ss_dssp             CCBCHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHH
T ss_conf             8678899999999998775