HHsearch results for GI: 254780902 and protein with PDBid: 1w0d_A
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, structural genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=0 Score=706.93 Aligned_cols=331 Identities=18% Similarity=0.158 Sum_probs=295.6
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 67997598630899999999984179984489982748998652862778999999865938872644898544321124
Q gi|254780902|r 9 PVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQARVKEFNL 88 (412)
Q Consensus 9 ~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~~~~~~~l 88 (412)
+|++|||||||||||+++++||++...+++|+++++|+++|++||+++|+++++++++++++||||+++|.++.
T Consensus 3 kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~G~vg~p~~~~------ 76 (337)
T 1w0d_A 3 KLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS------ 76 (337)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT------
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCC------
T ss_conf 89997888753999999999999860686699996305208853993759999999858949878879998998------
Q ss_pred CCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCC-CCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEE
Q ss_conf 422110458989732966883058-8048787788-87786799850566630010147778845999995488861025
Q gi|254780902|r 89 KKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIP-GWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQTIEK 166 (412)
Q Consensus 89 ~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~-~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~g~~~~~ 166 (412)
+.+.+|+|+.||+.||+|+|+||+ .++++|.+.+ .+++|+|||||||||+|+|.++....+.
T Consensus 77 ~~~~~~~~l~LR~~ldlyaniRP~r~~~g~~~~~~~~~~iD~vivREnteG~Y~g~~~~~~~~~---------------- 140 (337)
T 1w0d_A 77 GVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGT---------------- 140 (337)
T ss_dssp THHHHHTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCCCEEEEEEECSCSGGGCCEEEESTTS----------------
T ss_pred CCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCC----------------
T ss_conf 8766466589999708761466521368888844577898789871025562005786032589----------------
Q ss_pred EEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
Q ss_conf 54124665301011105146889999999999865998999974267775108999999999863100245423200024
Q gi|254780902|r 167 EVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDELGITYTH 246 (412)
Q Consensus 167 ~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~~~i~~~~ 246 (412)
..+.+..++.+|+.+++||+|+||+||++|+++||++||+||||.|||+|+++++|++++ ||+|+++|
T Consensus 141 -----~~e~a~~~~~~t~~~~~RIar~Afe~A~~rrk~vt~v~Kanv~~~t~glf~~~~~eva~~-------yp~i~~~~ 208 (337)
T 1w0d_A 141 -----PNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGEC-------YPDVEVAY 208 (337)
T ss_dssp -----TTCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHHHTT-------CTTSEEEE
T ss_pred -----CCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH-------CCCCEEHH
T ss_conf -----873599986132677767789999999848995699968872145779999999998865-------78734115
Q ss_pred HHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC-EEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf 36999999985496651-886321023267888877507532312431279875-1442122220345565542487755
Q gi|254780902|r 247 RLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGK-TMETEAAHGTVTRHYRQHQQGKETS 324 (412)
Q Consensus 247 ~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~-~~mfEp~HGSAPd~~g~~iaGk~iA 324 (412)
++||+++||||++|++| ||||+|||||||||++|+++||+|++||+|+|+++. .+||||+|||||| |||||+|
T Consensus 209 ~~vD~~~~~lv~~P~~fdViv~~Nl~GDilSDlaa~l~GglGl~psan~g~~~~~~a~fEp~HGsapd-----iaGk~ia 283 (337)
T 1w0d_A 209 QHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPD-----IAGQGIA 283 (337)
T ss_dssp EEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGG-----GTTSSCS
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH-----HCCCCCC
T ss_conf 75879999862598537679875156788999998861865325666667431331000356665054-----4699964
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHH
Q ss_conf 47279999999999986302573038999999999999999879816323001578887130999999999999
Q gi|254780902|r 325 TNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFIEKISDNL 398 (412)
Q Consensus 325 ~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T~ef~daI~~~l 398 (412)
||+|||||++|||+||| +.++|++|++||.+++.++. + +.++|+||+|||+++|
T Consensus 284 -NP~a~ils~ammL~~lg-------~~~~a~~i~~Av~~~l~~~~-----~-------~~~~T~d~gdav~~~l 337 (337)
T 1w0d_A 284 -DPTAAIMSVALLLSHLG-------EHDAAARVDRAVEAHLATRG-----S-------ERLATSDVGERIAAAL 337 (337)
T ss_dssp -CCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHCT-----T-------CCCCHHHHHHHHHHTC
T ss_pred -CCHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHCC-----C-------CCCCHHHHHHHHHHCC
T ss_conf -95999999999999859-------97899999999999997359-----9-------9778399999999649