HHsearch results for GI: 254780902 and protein with PDBid: 1w0d_A

>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, structural genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00  E-value=0  Score=706.93  Aligned_cols=331  Identities=18%  Similarity=0.158  Sum_probs=295.6

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             67997598630899999999984179984489982748998652862778999999865938872644898544321124
Q gi|254780902|r    9 PVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQARVKEFNL   88 (412)
Q Consensus         9 ~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~~~~~~~l   88 (412)
                      +|++|||||||||||+++++||++...+++|+++++|+++|++||+++|+++++++++++++||||+++|.++.      
T Consensus         3 kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~G~vg~p~~~~------   76 (337)
T 1w0d_A            3 KLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS------   76 (337)
T ss_dssp             EEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT------
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCC------
T ss_conf             89997888753999999999999860686699996305208853993759999999858949878879998998------


Q ss_pred             CCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCC-CCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEE
Q ss_conf             422110458989732966883058-8048787788-87786799850566630010147778845999995488861025
Q gi|254780902|r   89 KKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIP-GWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQTIEK  166 (412)
Q Consensus        89 ~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~-~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~g~~~~~  166 (412)
                      +.+.+|+|+.||+.||+|+|+||+ .++++|.+.+ .+++|+|||||||||+|+|.++....+.                
T Consensus        77 ~~~~~~~~l~LR~~ldlyaniRP~r~~~g~~~~~~~~~~iD~vivREnteG~Y~g~~~~~~~~~----------------  140 (337)
T 1w0d_A           77 GVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGT----------------  140 (337)
T ss_dssp             THHHHHTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCCCEEEEEEECSCSGGGCCEEEESTTS----------------
T ss_pred             CCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCC----------------
T ss_conf             8766466589999708761466521368888844577898789871025562005786032589----------------


Q ss_pred             EEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
Q ss_conf             54124665301011105146889999999999865998999974267775108999999999863100245423200024
Q gi|254780902|r  167 EVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDELGITYTH  246 (412)
Q Consensus       167 ~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~~~i~~~~  246 (412)
                           ..+.+..++.+|+.+++||+|+||+||++|+++||++||+||||.|||+|+++++|++++       ||+|+++|
T Consensus       141 -----~~e~a~~~~~~t~~~~~RIar~Afe~A~~rrk~vt~v~Kanv~~~t~glf~~~~~eva~~-------yp~i~~~~  208 (337)
T 1w0d_A          141 -----PNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGEC-------YPDVEVAY  208 (337)
T ss_dssp             -----TTCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHHHTT-------CTTSEEEE
T ss_pred             -----CCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH-------CCCCEEHH
T ss_conf             -----873599986132677767789999999848995699968872145779999999998865-------78734115


Q ss_pred             HHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC-EEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf             36999999985496651-886321023267888877507532312431279875-1442122220345565542487755
Q gi|254780902|r  247 RLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGK-TMETEAAHGTVTRHYRQHQQGKETS  324 (412)
Q Consensus       247 ~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~-~~mfEp~HGSAPd~~g~~iaGk~iA  324 (412)
                      ++||+++||||++|++| ||||+|||||||||++|+++||+|++||+|+|+++. .+||||+||||||     |||||+|
T Consensus       209 ~~vD~~~~~lv~~P~~fdViv~~Nl~GDilSDlaa~l~GglGl~psan~g~~~~~~a~fEp~HGsapd-----iaGk~ia  283 (337)
T 1w0d_A          209 QHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPD-----IAGQGIA  283 (337)
T ss_dssp             EEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCGG-----GTTSSCS
T ss_pred             HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH-----HCCCCCC
T ss_conf             75879999862598537679875156788999998861865325666667431331000356665054-----4699964


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHH
Q ss_conf             47279999999999986302573038999999999999999879816323001578887130999999999999
Q gi|254780902|r  325 TNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFIEKISDNL  398 (412)
Q Consensus       325 ~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T~ef~daI~~~l  398 (412)
                       ||+|||||++|||+|||       +.++|++|++||.+++.++.     +       +.++|+||+|||+++|
T Consensus       284 -NP~a~ils~ammL~~lg-------~~~~a~~i~~Av~~~l~~~~-----~-------~~~~T~d~gdav~~~l  337 (337)
T 1w0d_A          284 -DPTAAIMSVALLLSHLG-------EHDAAARVDRAVEAHLATRG-----S-------ERLATSDVGERIAAAL  337 (337)
T ss_dssp             -CCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHHCT-----T-------CCCCHHHHHHHHHHTC
T ss_pred             -CCHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHCC-----C-------CCCCHHHHHHHHHHCC
T ss_conf             -95999999999999859-------97899999999999997359-----9-------9778399999999649