HHsearch results for GI: 254780902 and protein with PDBid: 2d4v_A
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=0 Score=733.24 Aligned_cols=361 Identities=20% Similarity=0.210 Sum_probs=308.7
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEEEECCHHHHHHH--CCCCCHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 6799759863089999999998417-------9984489982748998652--862778999999865938872644898
Q gi|254780902|r 9 PVVSLDGDEMTRIIWQLIQENLIHP-------YLDIKIEYFDLSIQNRDLT--DDQVTIDAAHAIKNCGVGIKCATITAD 79 (412)
Q Consensus 9 ~Iv~l~GDgiG~Ei~~~~l~vl~~~-------~~~i~~e~~d~G~~~~d~t--g~~l~~da~eaik~~~v~lkg~~~tP~ 79 (412)
.|.+||||||||||++++++||++. .++|+|.++++|.++++++ |+++|+++++++++++++||||+++|.
T Consensus 28 ~IavipGDGIGpEV~~~~~~Vl~~~~~~~~~~~~~i~~~~~~~G~~a~~~~g~g~~lP~et~~~~~~~dail~G~i~~p~ 107 (429)
T 2d4v_A 28 IIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETPV 107 (429)
T ss_dssp EEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf 89997878320999999999999986675178764289997256877645188986989999999878999979877888
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCCC-CCCCEEEEECCCCCCCCCCEEEECCCCEEEEE-E
Q ss_conf 544321124422110458989732966883058-80487877888-77867998505666300101477788459999-9
Q gi|254780902|r 80 QARVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIPG-WKKPIIIGRHAFGDQYRATDFQFPSKGKLILK-F 156 (412)
Q Consensus 80 ~~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~~-~~~divivREnteg~Y~gie~~~~~~~~~~i~-~ 156 (412)
+. +.+|+|+.||+.||||+|+||+ .++++|.+... .++|+|||||||||+|+|.++....+....+. +
T Consensus 108 ~~---------~~~~~~l~LR~~ldLyanlRP~~~~~g~~~~~~~~~~iD~vIVREnteG~Y~g~~~~~~~~~~~~~~~~ 178 (429)
T 2d4v_A 108 GG---------GIRSLNVAMRQDLDLYVCLRPVRYFEGTPSPMRHPEKVDMVIFRENSEDIYAGIEWPAGSPEAEKIIRF 178 (429)
T ss_dssp SS---------SSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEECTTCHHHHHHHHH
T ss_pred CC---------CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 88---------753566899986797465423336678887334756677799974676543551124677320012000
Q ss_pred ECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 54888610255412466530101110514688999999999986599-89999742677751089999999998631002
Q gi|254780902|r 157 VGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQL-PLYLSTKDTILKSYDGRFKNIFNEIFEAEFKN 235 (412)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~-kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~ 235 (412)
..+ ...........+.++.++.+|+.+++|++|+||+||++|++ +||++||+|||+.++|+|++++++|+++||..
T Consensus 179 ~~~---~~~~~~~~~~~~~a~~~~v~t~~~~~Ri~r~Af~~A~~r~~k~vt~v~KaNvl~~s~glf~~~~~~va~~~~~~ 255 (429)
T 2d4v_A 179 LRE---EMGVTKIRFPDSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEGGFRDWGYALAEREFAG 255 (429)
T ss_dssp HHH---TSCCCCCSCGGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHHSTT
T ss_pred HHH---HCCCCEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 001---02520340798479999986117789999999999986599806888457623002006999999998876056
Q ss_pred C--------------------------CCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 4--------------------------542320002436999999985496651-8863210232678888775075323
Q gi|254780902|r 236 Q--------------------------FDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGL 288 (412)
Q Consensus 236 ~--------------------------~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGl 288 (412)
+ ..|++++++|+++||+|||||++|++| ||||+|||||||||++|+++|||||
T Consensus 256 ~~~~wr~~~~~~~~~~~~~~~~~e~~~~~~~~i~~~~~~vD~~a~~lv~~P~~FDVIv~~NlfGDILSDlaa~l~GslGl 335 (429)
T 2d4v_A 256 RVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNGDYVSDALAAEVGGIGM 335 (429)
T ss_dssp TEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCGGG
T ss_pred CCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCC
T ss_conf 55331122110000243344320002446764587379999999998439301757741321447899999998604565
Q ss_pred CEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 12431279875144212222034556554248775547279999999999986302573038999999999999999879
Q gi|254780902|r 289 MTSVLITADGKTMETEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDG 368 (412)
Q Consensus 289 apSanig~~~~~~mfEp~HGSAPd~~g~~iaGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G 368 (412)
+||+|||++ .+||||+|||||| |||||+| ||+|||||++|||+|+| +.++|++|++||.+++++|
T Consensus 336 ~pSanig~~--~a~FEp~HGSAPd-----iaGk~iA-NP~A~IlS~amML~~lg-------~~~~A~~Ie~AV~~vl~~G 400 (429)
T 2d4v_A 336 APGANLSDT--HAIFEATHGTAPD-----IAGQGKA-NPSSLILSAVMMLEHLG-------WGEAAQAIVAAMNATIAAG 400 (429)
T ss_dssp CCCEEECSS--CEEEECSCCCCTT-----TTTTTCC-CCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCC--CEEEECCCCCCCC-----CCCCCCC-CCHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCC
T ss_conf 641102898--7577779887523-----3799964-92999999999999879-------9889999999999999769
Q ss_pred CCCHHHHHCCCCCCCCEEHHHHHHHHHHH
Q ss_conf 81632300157888713099999999999
Q gi|254780902|r 369 FMTKDLALLIGPEQDWLSTTDFIEKISDN 397 (412)
Q Consensus 369 ~~T~DLg~~~~~~~~~~~T~ef~daI~~~ 397 (412)
++|+|||+.. ++...+||+||+|||+++
T Consensus 401 ~~T~DLgg~~-~~~~~~sT~e~~~aIi~r 428 (429)
T 2d4v_A 401 EVTGDLAALR-GDVPALSTTEFTAALIRR 428 (429)
T ss_dssp CEEHHHHTTC-TTCCEECHHHHHHHHHTT
T ss_pred CCCCCCCCCC-CCCCCCCHHHHHHHHHHH
T ss_conf 9664557788-898876899999999951