PSIBLAST alignment of GI: 254780902 and protein with PDB id: 1lwd
>gi|27065480|pdb|1LWD|A Chain A, Crystal Structure Of Nadp-Dependent Isocitrate Dehydrogenase From Porcine Heart Mitochondria Length = 413
>gi|27065481|pdb|1LWD|B Chain B, Crystal Structure Of Nadp-Dependent Isocitrate Dehydrogenase From Porcine Heart Mitochondria Length = 413
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 257/410 (62%), Positives = 316/410 (77%), Gaps = 7/410 (1%)
Query: 2 KKIKVTKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDAA 61
++IKV KPVV +DGDEMTRIIWQ I+E LI P++D++++YFDL + NRD T+DQVTID+A
Sbjct: 3 QRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSA 62
Query: 62 HAIKNCGVGIKCATITADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRLI 121
A + V +KCATIT D+ARV+EF LKKMWKSPNGTIRNILGG +FREPIIC N+PRL+
Sbjct: 63 LATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLV 122
Query: 122 PGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQ-TIEKEVFDSPGSGIAMAM 180
PGW KPI IGRHA GDQY+ATDF G + F DG + EV++ P G+ M M
Sbjct: 123 PGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPAGGVGMGM 182
Query: 181 YNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDEL 240
YN D+SI FA + QYA+ ++ PLY+STK+TILK+YDGRFK+IF EIFE +K FD+
Sbjct: 183 YNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKY 242
Query: 241 GITYTHRLIDDMVASSIKWSGGYIWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKT 300
I Y HRLIDDMVA +K SGG++WACKNYDGDVQSDI+AQGFGSLGLMTSVL+ DGKT
Sbjct: 243 KIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKT 302
Query: 301 METEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERV 360
+E EAAHGTVTRHYR+HQ+G+ TSTN IASIFAWTRGL HR KLD N +L +FA+ LE+V
Sbjct: 303 IEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKV 362
Query: 361 CIKTVEDGFMTKDLALLIGP------EQDWLSTTDFIEKISDNLRDALQK 404
C++TVE G MTKDLA I + +L+T+DF++ I NL AL +
Sbjct: 363 CVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNLDRALGR 412