RPSBLAST alignment of GI: 254780902 and protein with PDBid: 1lwd
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3inm_A* 2cmj_A* 2cmv_A* Length = 413
Score = 435 bits (1120), Expect = e-123
Identities = 257/411 (62%), Positives = 318/411 (77%), Gaps = 7/411 (1%)
Query: 1 MKKIKVTKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDLTDDQVTIDA 60
++IKV KPVV +DGDEMTRIIWQ I+E LI P++D++++YFDL + NRD T+DQVTID+
Sbjct: 2 DQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDS 61
Query: 61 AHAIKNCGVGIKCATITADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSNVPRL 120
A A + V +KCATIT D+ARV+EF LKKMWKSPNGTIRNILGG +FREPIIC N+PRL
Sbjct: 62 ALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRL 121
Query: 121 IPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQTIEK-EVFDSPGSGIAMA 179
+PGW KPI IGRHA GDQY+ATDF G + F DG + ++ EV++ P G+ M
Sbjct: 122 VPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPAGGVGMG 181
Query: 180 MYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDE 239
MYN D+SI FA + QYA+ ++ PLY+STK+TILK+YDGRFK+IF EIFE +K FD+
Sbjct: 182 MYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDK 241
Query: 240 LGITYTHRLIDDMVASSIKWSGGYIWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGK 299
I Y HRLIDDMVA +K SGG++WACKNYDGDVQSDI+AQGFGSLGLMTSVL+ DGK
Sbjct: 242 YKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGK 301
Query: 300 TMETEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLER 359
T+E EAAHGTVTRHYR+HQ+G+ TSTN IASIFAWTRGL HR KLD N +L +FA+ LE+
Sbjct: 302 TIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEK 361
Query: 360 VCIKTVEDGFMTKDLALLIG------PEQDWLSTTDFIEKISDNLRDALQK 404
VC++TVE G MTKDLA I + +L+T+DF++ I NL AL +
Sbjct: 362 VCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNLDRALGR 412